RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PIM3Q86V86 326 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 WDR5BQ86VZ2 330 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 FBXL6Q8N531 539 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 FRMD1Q8N878 549 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 RASGEF1AQ8N9B8 481 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 DTWD2Q8NBA8 298 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 FAM174AQ8TBP5 190 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 SNX19Q92543 992 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 FOXJ1Q92949 421 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 SGF29Q96ES7 293 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 APOOQ9BUR5 198 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 SLC13A1Q9BZW2 595 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 CNOT10Q9H9A5 744 aaKnown RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 SARS2Q9NP81 518 aaKnown RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 SPATS2LQ9NUQ6 558 aaKnown RBP16.64■□□□□ 0.25
SNX1-203ENST00000558040 NKIRAS1Q9NYS0 192 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 KLHL42Q9P2K6 505 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 ATXN10Q9UBB4 475 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 MED16Q9Y2X0 877 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 OR1A2Q9Y585 309 aa16.64■□□□□ 0.25
SNX1-203ENST00000558040 PLXND1Q9Y4D7 1925 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 A0A1W2PPC4 97 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 TMEM120BA0PK00 339 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 OR2AG2A6NM03 316 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 A6NNZ2 444 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 IQCF5A8MTL0 148 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 METTL12A8MUP2 240 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 MEI4A8MW99 385 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 TYROBPO43914 113 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 SPAG7O75391 227 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 ZWINTO95229 277 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 GSTM1P09488 218 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 CREB1P16220 341 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 ZNF37AP17032 561 aaPredicted RBP16.63■□□□□ 0.25
SNX1-203ENST00000558040 CLCN7P51798 805 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 SLC18A1P54219 525 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 YPEL5P62699 121 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 GSTM4Q03013 218 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 ZNF460Q14592 562 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 TSNAXIP1Q2TAA8 658 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 KLC3Q6P597 504 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 KYAT3Q6YP21 454 aaKnown RBP16.63■□□□□ 0.25
SNX1-203ENST00000558040 OTOAQ7RTW8 1153 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 C11orf74Q86VG3 221 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 LONP2Q86WA8 852 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 NKAPQ8N5F7 415 aaKnown RBP16.63■□□□□ 0.25
SNX1-203ENST00000558040 TMEM105Q8N8V8 129 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 TMEM145Q8NBT3 493 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 CD200R1Q8TD46 325 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 INPP5DQ92835 1189 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 FUBP1Q96AE4 644 aaKnown RBP16.63■□□□□ 0.25
SNX1-203ENST00000558040 FAM136AQ96C01 138 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 RMI1Q9H9A7 625 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 LATS2Q9NRM7 1088 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 OGFRQ9NZT2 677 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 MBD1Q9UIS9 605 aaPredicted RBP16.63■□□□□ 0.25
SNX1-203ENST00000558040 GRID1Q9ULK0 1009 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 GPR34Q9UPC5 381 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 INVSQ9Y283 1065 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 DHRS7Q9Y394 339 aa16.63■□□□□ 0.25
SNX1-203ENST00000558040 TM9SF1O15321 606 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 KLHL2O95198 593 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 WISP3O95389 354 aaPredicted RBP16.62■□□□□ 0.25
SNX1-203ENST00000558040 LTA4HP09960 611 aaKnown RBP16.62■□□□□ 0.25
SNX1-203ENST00000558040 TDGF1P13385 188 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 ZNF8P17098 575 aaPredicted RBP16.62■□□□□ 0.25
SNX1-203ENST00000558040 ITGB6P18564 788 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 CD27P26842 260 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 HTR1BP28222 390 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 RABIFP47224 123 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 FNTBP49356 437 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 RGS4P49798 205 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 CLDN2P57739 230 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 TIAL1Q01085 375 aaKnown RBP eCLIP16.62■□□□□ 0.252e-8■■■■■ 28.9
SNX1-203ENST00000558040 CSTF1Q05048 431 aaKnown RBP16.62■□□□□ 0.25
SNX1-203ENST00000558040 DMWDQ09019 674 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 FAM83EQ2M2I3 478 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 AGAP9Q5VTM2 703 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 DOK6Q6PKX4 331 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 TMEM220Q6QAJ8 160 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 TSSK4Q6SA08 328 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 GCNT7Q6ZNI0 430 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 CLEC14AQ86T13 490 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 TRAPPC5Q8IUR0 188 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 ZBTB2Q8N680 514 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 SIDT2Q8NBJ9 832 aaKnown RBP16.62■□□□□ 0.25
SNX1-203ENST00000558040 CCM2Q9BSQ5 444 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 LGR4Q9BXB1 951 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 FBXO4Q9UKT5 387 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 TMEM98Q9Y2Y6 226 aa16.62■□□□□ 0.25
SNX1-203ENST00000558040 KLHL33A6NCF5 533 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 POM121BA6NF01 834 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 EIF3FO00303 357 aaPredicted RBP16.61■□□□□ 0.25
SNX1-203ENST00000558040 SGTAO43765 313 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 NUAK1O60285 661 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 APOA4P06727 396 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 CCDC166P0CW27 439 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 DGKAP23743 735 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 THOP1P52888 689 aa16.61■□□□□ 0.25
SNX1-203ENST00000558040 CTSCP53634 463 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms