RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GTF2H3Q13889 308 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 KBTBD12Q3ZCT8 623 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 PACS1Q6VY07 963 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 CHST15Q7LFX5 561 aaPredicted RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 GALNT13Q8IUC8 556 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 LRRC61Q9BV99 259 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 SLC13A1Q9BZW2 595 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 ZDHHC5Q9C0B5 715 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 UCKL1Q9NWZ5 548 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 SLC23A2Q9UGH3 650 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 TP53BP1Q12888 1972 aaPredicted RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 TDRD6O60522 2096 aaKnown RBP15.07■□□□□ 0
NEDD1-213ENST00000557644 GVINP1Q7Z2Y8 2422 aa15.07■□□□□ 0
NEDD1-213ENST00000557644 IQCF5A8MTL0 148 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 CFAP99D6REC4 459 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 LRP3O75074 770 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 AHSGP02765 367 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 GSTA2P09210 222 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 CNSTQ6PJW8 725 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 IL27RAQ6UWB1 636 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 C11orf96Q7Z7L8 435 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 AENQ8WTP8 325 aaKnown RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.06■□□□□ 0
NEDD1-213ENST00000557644 OR2M4Q96R27 311 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 TCF12Q99081 682 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 EPB41L4BQ9H329 900 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 A0A1B0GTQ1 180 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 FAM186AA6NE01 2351 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 FAM159BA6NKW6 160 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 LRP4O75096 1905 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 ACP5P13686 325 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 ZNF7P17097 686 aaPredicted RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 AK4P27144 223 aaPredicted RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 FMO4P31512 558 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 PPARGP37231 505 aaPredicted RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 RXRGP48443 463 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 ARRB1P49407 418 aaPredicted RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 ATXN3P54252 364 aaPredicted RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 EIF3BP55884 814 aaKnown RBP15.06■□□□□ 0
NEDD1-213ENST00000557644 PRR23CQ6ZRP0 262 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 CYS1Q717R9 158 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 LRRTM4Q86VH4 590 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 GATAD2AQ86YP4 633 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 SPNS2Q8IVW8 549 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 LMNTD2Q8IXW0 634 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 HEXDCQ8WVB3 486 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 BIRC8Q96P09 236 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 CLPBQ9H078 707 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 P2RY12Q9H244 342 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 RMI1Q9H9A7 625 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 RABGEF1Q9UJ41 708 aa15.06■□□□□ 0
NEDD1-213ENST00000557644 GPR89AB7ZAQ6 455 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 CDX4O14627 284 aaPredicted RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 PRMT5O14744 637 aaPredicted RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 RIPK2O43353 540 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 GDF9O60383 454 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 SPAG6O75602 509 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 PIAS2O75928 621 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 CER1O95813 267 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 GPR89BP0CG08 455 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 MCM3P25205 808 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 PBLDP30039 288 aaPredicted RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 STX2P32856 288 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 LEPRP48357 1165 aaKnown RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 BLKP51451 505 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 HNRNPKP61978 463 aaKnown RBP eCLIP15.05■□□□□ 0
NEDD1-213ENST00000557644 CTSL3PQ5NE16 218 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 TRMT10CQ7L0Y3 403 aaKnown RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 CTAGE3PQ8IX95 158 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 ZNF548Q8NEK5 533 aaPredicted RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 EDEM2Q9BV94 578 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 INTS10Q9NVR2 710 aaKnown RBP15.05■□□□□ 0
NEDD1-213ENST00000557644 GULP1Q9UBP9 304 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 FAM8A1Q9UBU6 413 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 KCNK6Q9Y257 313 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 DNAJC16Q9Y2G8 782 aa15.05■□□□□ 0
NEDD1-213ENST00000557644 PTPRZ1P23471 2315 aaPredicted RBP15.05■□□□□ -0
NEDD1-213ENST00000557644 POP7O75817 140 aaKnown RBP15.05■□□□□ -0
NEDD1-213ENST00000557644 CTSEP14091 401 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 ITGB6P18564 788 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 DGKAP23743 735 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 PRLHRP49683 370 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 CTBSQ01459 385 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 RNF187Q5TA31 235 aaPredicted RBP15.05■□□□□ -0
NEDD1-213ENST00000557644 NAPRTQ6XQN6 538 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 STRA8Q7Z7C7 330 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 PPM1NQ8N819 430 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 LKAAEAR1Q8TD35 194 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 LMX1AQ8TE12 382 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 FAM136AQ96C01 138 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 MRRFQ96E11 262 aaKnown RBP15.05■□□□□ -0
NEDD1-213ENST00000557644 ATXN7L3BQ96GX2 97 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 GPR34Q9UPC5 381 aa15.05■□□□□ -0
NEDD1-213ENST00000557644 H3BM21 787 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 KMOO15229 486 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 CTIFO43310 598 aaKnown RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 FAM155BO75949 473 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 EPHA8P29322 1005 aaPredicted RBP15.04■□□□□ -0
NEDD1-213ENST00000557644 PHBP35232 272 aa15.04■□□□□ -0
NEDD1-213ENST00000557644 SLC29A2Q14542 456 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms