RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 GPR18Q14330 331 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 IL11RAQ14626 422 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 DEFB109BQ30KR1 87 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 ZDHHC20Q5W0Z9 365 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 KDELC1Q6UW63 502 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 C6orf15Q6UXA7 325 aaPredicted RBP18.49■□□□□ 0.55
CDKN3-209ENST00000556102 PRSS42Q7Z5A4 293 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 GDAP1Q8TB36 358 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 DTX3LQ8TDB6 740 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 BRSK1Q8TDC3 778 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 TFB1MQ8WVM0 346 aaKnown RBP18.49■□□□□ 0.55
CDKN3-209ENST00000556102 APOBEC4Q8WW27 367 aaKnown RBP18.49■□□□□ 0.55
CDKN3-209ENST00000556102 CXorf40BQ96DE9 158 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 OR6C1Q96RD1 312 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 SLC40A1Q9NP59 571 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 EPHA6Q9UF33 1036 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 ANAPC2Q9UJX6 822 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 NBASA2RRP1 2371 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 LOC285095A0A1B0GVY8 99 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 SPOPO43791 374 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 KCNJ13O60928 360 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 MFAP3LO75121 409 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 EPOP01588 193 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 NFKB1P19838 968 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 CDKN2BP42772 138 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 WNT3AP56704 352 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 SH3BP2P78314 561 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 WASHC5Q12768 1159 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 TCEAL1Q15170 157 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 TAZQ16635 292 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 SKIDA1Q1XH10 827 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 CACHD1Q5VU97 1274 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 C16orf46Q6P387 395 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 VSTM4Q8IW00 320 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 TTC30BQ8N4P2 665 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 ZDHHC12Q96GR4 267 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 TTC25Q96NG3 672 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 EPN3Q9H201 632 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 IL26Q9NPH9 171 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 SAE1Q9UBE0 346 aaPredicted RBP18.48■□□□□ 0.55
CDKN3-209ENST00000556102 TRIM10Q9UDY6 481 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 INTUQ9ULD6 942 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 HYOU1Q9Y4L1 999 aa18.48■□□□□ 0.55
CDKN3-209ENST00000556102 NAV2Q8IVL1 2488 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 DOPEY2Q9Y3R5 2298 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 MTSS1O43312 755 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 KIF1CO43896 1103 aaKnown RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 CST8O60676 142 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 NDUFA10O95299 355 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 PECAM1P16284 738 aaPredicted RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 COMTP21964 271 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 F8A1P23610 371 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 DLSTP36957 453 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 SPAM1P38567 509 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 HALP42357 657 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 TNNT3P45378 269 aaPredicted RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 NOMO1Q15155 1222 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 SIRPB2Q5JXA9 342 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 ATP1A1-AS1Q5TC04 95 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 RASGRP3Q8IV61 690 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 GALNT6Q8NCL4 622 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 KLHL6Q8WZ60 621 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 STAMBPL1Q96FJ0 436 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 ZCCHC2Q9C0B9 1178 aaKnown RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 RAB33BQ9H082 229 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 ZNF71Q9NQZ8 489 aaPredicted RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.47■□□□□ 0.552e-9■■□□□ 12.2
CDKN3-209ENST00000556102 HACD3Q9P035 362 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 IL17CQ9P0M4 197 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 KLHL8Q9P2G9 620 aaPredicted RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 CROTQ9UKG9 612 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 WDR37Q9Y2I8 494 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 PCDHB3Q9Y5E6 796 aa18.47■□□□□ 0.55
CDKN3-209ENST00000556102 MRPS18BQ9Y676 258 aaKnown RBP18.47■□□□□ 0.55
CDKN3-209ENST00000556102 GOLGA6L3A6NEY3 463 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 PSTPIP1O43586 416 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 KIAA0754O94854 1291 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 FGF5P12034 268 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 CASRP41180 1078 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 DMPKQ09013 629 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 SEPT6Q14141 434 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 LDLRAP1Q5SW96 308 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 KAZNQ674X7 775 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 IRGCQ6NXR0 463 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 CYB5D1Q6P9G0 228 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 SPOCD1Q6ZMY3 1216 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 FAM92BQ6ZTR7 304 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 AMZ2Q86W34 360 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 SLC25A41Q8N5S1 370 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 RNF31Q96EP0 1072 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 ABHD17AQ96GS6 310 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 FCRL5Q96RD9 977 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 KCTD3Q9Y597 815 aa18.46■□□□□ 0.55
CDKN3-209ENST00000556102 CYSRT1A8MQ03 144 aa18.45■□□□□ 0.54
CDKN3-209ENST00000556102 SPAG6O75602 509 aa18.45■□□□□ 0.54
CDKN3-209ENST00000556102 NELFEP18615 380 aaKnown RBP18.45■□□□□ 0.54
CDKN3-209ENST00000556102 HLA-DPA1P20036 260 aa18.45■□□□□ 0.54
CDKN3-209ENST00000556102 PTMSP20962 102 aa18.45■□□□□ 0.54
CDKN3-209ENST00000556102 CHRNA4P43681 627 aa18.45■□□□□ 0.54
CDKN3-209ENST00000556102 LLGL1Q15334 1064 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms