RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 IFT88Q13099 833 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SLC12A1Q13621 1099 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 INPP5AQ14642 412 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CYTH1Q15438 398 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ZKSCAN8Q15776 578 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CNGA3Q16281 694 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 UAP1L1Q3KQV9 507 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC153Q494R4 210 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TMEM201Q5SNT2 666 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 GPR158Q5T848 1215 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TCEAL6Q6IPX3 200 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CXorf57Q6NSI4 855 aaKnown RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 NEPROQ6NW34 567 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ESRP1Q6NXG1 681 aaKnown RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 LRFN4Q6PJG9 635 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 KIAA0408Q6ZU52 694 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC121Q6ZUS5 278 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 FAM47EQ6ZV65 393 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC91Q7Z6B0 441 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 YTHDF3Q7Z739 585 aaKnown RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 LCA5Q86VQ0 697 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 NUDCD3Q8IVD9 361 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CNTN4Q8IWV2 1026 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 OTUD6BQ8N6M0 293 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC63Q8NA47 563 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 OR52K2Q8NGK3 314 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 PPP1R14CQ8TAE6 165 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SHKBP1Q8TBC3 707 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 BRSK1Q8TDC3 778 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TCEAL3Q969E4 200 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ACDQ96AP0 544 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 VPS39Q96JC1 886 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 AGAP2Q99490 1192 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 MGME1Q9BQP7 344 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 FEM1AQ9BSK4 669 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 SLC46A2Q9BY10 475 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ADGRE3Q9BY15 652 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 RHOJQ9H4E5 214 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TASP1Q9H6P5 420 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 MAN1C1Q9NR34 630 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 TREX1Q9NSU2 369 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 GEMIN8Q9NWZ8 242 aaKnown RBP6.8□□□□□ -1.32
SLIRP-204ENST00000555890 KLHL14Q9P2G3 628 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 MID2Q9UJV3 735 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 RIMKLBQ9ULI2 386 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 PHTF1Q9UMS5 762 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 PCDHB10Q9UN67 800 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 ARL2BPQ9Y2Y0 163 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 PSAT1Q9Y617 370 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 CABIN1Q9Y6J0 2220 aa6.8□□□□□ -1.32
SLIRP-204ENST00000555890 A0A096LPK6 155 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CXorf51AA0A1B0GTR3 108 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC78A2IDD5 438 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 MROH6A6NGR9 719 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CCT8L1PA6NM43 557 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 C2orf81A6NN90 581 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ADARB2-AS1A8MUL3 147 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 H3BM21 787 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 EDF1O60869 148 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ZMPSTE24O75844 475 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ALDOAP04075 364 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 APOA4P06727 396 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 POU2F2P09086 479 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ATXN1LP0C7T5 689 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 COL6A2P12110 1019 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 GJA1P17302 382 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 GLDCP23378 1020 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CRABP2P29373 138 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ADH7P40394 386 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CSKP41240 450 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ETV4P43268 484 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ARCN1P48444 511 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CD151P48509 253 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 PLK1P53350 603 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ARF5P84085 180 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 PDE1CQ14123 709 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 GAS6Q14393 721 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 USP10Q14694 798 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 POU4F3Q15319 338 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 FSCBQ5H9T9 825 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 FSTL4Q6MZW2 842 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 C6orf89Q6UWU4 347 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 RAPH1Q70E73 1250 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SDCCAG8Q86SQ7 713 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SRLQ86TD4 932 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ZC3HC1Q86WB0 502 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 BBS7Q8IWZ6 715 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 CMTM8Q8IZV2 173 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 DCAF4L2Q8NA75 395 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 FIBINQ8TAL6 211 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 BLOC1S5Q8TDH9 187 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SH3RF2Q8TEC5 729 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 STYXQ8WUJ0 223 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ADAMTS14Q8WXS8 1223 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 KLHL6Q8WZ60 621 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ISL2Q96A47 359 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 E2F7Q96AV8 911 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms