RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SCNN1BP51168 640 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 CDH4P55283 916 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 HPCAP84074 193 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 SP3Q02447 781 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 SMARCB1Q12824 385 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 PRKG2Q13237 762 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 FUT11Q495W5 492 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 ZBED5Q49AG3 693 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 TIGD2Q4W5G0 525 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 XKR7Q5GH72 579 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 RABL3Q5HYI8 236 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 CLLU1OSQ5K130 101 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 ZNF787Q6DD87 383 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 NADSYN1Q6IA69 706 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 PRR23BQ6ZRT6 265 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 SPRED1Q7Z699 444 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 SYVN1Q86TM6 617 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 CMTR2Q8IYT2 770 aaKnown RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 CFAP52Q8N1V2 620 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 TMEM199Q8N511 208 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 DHRSXQ8N5I4 330 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 TTC9BQ8N6N2 239 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 FNDC5Q8NAU1 212 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 DRAXINQ8NBI3 349 aaPredicted RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 LPCAT1Q8NF37 534 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 LINGO1Q96FE5 620 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 ZNF512Q96ME7 567 aaPredicted RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 ZNF382Q96SR6 550 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 LRRC3Q9BY71 257 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 CCSER2Q9H7U1 834 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 TRMT13Q9NUP7 481 aaKnown RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 SMPD3Q9NY59 655 aaPredicted RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 PKD2L2Q9NZM6 624 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 GMPR2Q9P2T1 348 aaKnown RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 MAGEL2Q9UJ55 1249 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 AGO1Q9UL18 857 aaKnown RBP6.93□□□□□ -1.3
TDP1-213ENST00000555880 GABRQQ9UN88 632 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 SPO11Q9Y5K1 396 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 VWA8A3KMH1 1905 aa6.93□□□□□ -1.3
TDP1-213ENST00000555880 A0A0D9SEW6 157 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 A0A1B0GTW7 788 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 IFRD1O00458 451 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 PLOD2O00469 737 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 STX7O15400 261 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 KDELR3O43731 214 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 KLK8O60259 260 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ACSL4O60488 711 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SYNCRIPO60506 623 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 NOL3O60936 208 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 CLDN11O75508 207 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SEC24DO94855 1032 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 RHOCP08134 193 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ENO2P09104 434 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 GNAO1P09471 354 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PRR35P0CG20 571 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PRSS56P0CW18 603 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 MTHFD1P11586 935 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 CDK4P11802 303 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CD9P21926 228 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 HOXD9P28356 352 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 PCSK6P29122 969 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 MC4RP32245 332 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 RFC2P35250 354 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ATP5C1P36542 298 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 CAPGP40121 348 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 RPS9P46781 194 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 AGTR2P50052 363 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 KCNQ1P51787 676 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CDH15P55291 814 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NKX3-2P78367 333 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ECT2LQ008S8 904 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PRKCZQ05513 592 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 DEFB115Q30KQ5 88 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SLC36A3Q495N2 470 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ZRANB3Q5FWF4 1079 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 FAM219BQ5XKK7 198 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CLVS1Q8IUQ0 354 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 EPHX4Q8IUS5 362 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 STK40Q8N2I9 435 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 EFHBQ8N7U6 833 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SIDT2Q8NBJ9 832 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 LEMD2Q8NC56 503 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 KLHDC9Q8NEP7 349 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 OR7D4Q8NG98 312 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 C2orf15Q8WU43 125 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 TRIB2Q92519 343 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 KCNJ9Q92806 393 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NSMCE2Q96MF7 247 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 C1orf50Q9BV19 199 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 ARHGAP39Q9C0H5 1083 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NUDT4Q9NZJ9 180 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 EIF2B4Q9UI10 523 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 FAF1Q9UNN5 650 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 TNPO3Q9Y5L0 923 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 FADS3Q9Y5Q0 445 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms