RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ADD3Q9UEY8 706 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TBC1D29Q9UFV1 150 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NARFQ9UHQ1 456 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF215Q9UL58 517 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ERVK-11Q9UQG0 969 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NIP7Q9Y221 180 aaKnown RBP eCLIP1.54□□□□□ -2.166e-7■■■■■ 31.5
PRPF39-208ENST00000554785 PAM16Q9Y3D7 125 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 OTOFQ9HC10 1997 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RTL1A6NKG5 1358 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 COL4A1P02462 1669 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF831Q5JPB2 1677 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 UBR2Q8IWV8 1755 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 DMXL1Q9Y485 3027 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 A0A1B0GVT2 93 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 hCG_1807616A0A1W2PRN6 198 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM202A6NGA9 273 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 OR6C75A6NL08 312 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 BTBD18B2RXH4 712 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HCRTR2O43614 444 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TSPAN9O75954 239 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SOX30O94993 753 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 OR2C1O95371 312 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 VNN2O95498 520 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NGFRP08138 427 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MCM3P25205 808 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HOXD3P31249 432 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PSMB10P40306 273 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 UBA7P41226 1012 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PIK3CAP42336 1068 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NUDT6P53370 316 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CDH8P55286 799 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NLRP5P59047 1200 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ROR2Q01974 943 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CXCL9Q07325 125 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CHAF1BQ13112 559 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 AIMP2Q13155 320 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 GPS2Q13227 327 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CTTNQ14247 550 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HNF4GQ14541 408 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 WTAPQ15007 396 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NAB2Q15742 525 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MMEL1Q495T6 779 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 DUSP28Q4G0W2 176 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RILPL1Q5EBL4 403 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HIST2H2BCQ6DN03 193 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HIST2H2BDQ6DRA6 164 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ANKRD54Q6NXT1 300 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 GLDNQ6ZMI3 551 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 USP50Q70EL3 339 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MTSS1LQ765P7 747 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CHST9Q7L1S5 443 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SHFQ7M4L6 423 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TICAM1Q8IUC6 712 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CCDC13Q8IYE1 715 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TEX11Q8IYF3 940 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ADGRF2Q8IZF7 708 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 OR14L1PQ8NHC6 308 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 OIT3Q8WWZ8 545 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ZKSCAN4Q969J2 545 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MIB2Q96AX9 1013 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 DCPSQ96C86 337 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 FAM122AQ96E09 287 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 FAM120BQ96EK7 910 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PGAM5Q96HS1 289 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NDST4Q9H3R1 872 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PDZD7Q9H5P4 517 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MKKSQ9NPJ1 570 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 GPR108Q9NPR9 543 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HIF1ANQ9NWT6 349 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RCOR1Q9UKL0 485 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 FZD10Q9ULW2 581 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SLC45A1Q9Y2W3 748 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 INSL5Q9Y5Q6 135 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PTGDR2Q9Y5Y4 395 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SESN1Q9Y6P5 492 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 STON1Q9Y6Q2 735 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MAU2Q9Y6X3 613 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CGNL1Q0VF96 1302 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 INSRP06213 1382 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NPC1L1Q9UHC9 1359 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RIC1Q4ADV7 1423 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 AK9Q5TCS8 1911 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 DOCK3Q8IZD9 2030 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CACNA1BQ00975 2339 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 SPTBN4Q9H254 2564 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 WDR87Q6ZQQ6 2873 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 FRYLO94915 3013 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 IGHV4-28A0A0C4DH34 117 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 BDP1A6H8Y1 2624 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 YDJCA8MPS7 323 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 AGAP14A8MT82 685 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 A8MZ25 164 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 INAFM1C9JVW0 142 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 J3KR12 359 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 PSMD14O00487 310 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 WNT9BO14905 357 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 TIMM23O14925 209 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 HSPA12AO43301 675 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CYC1P08574 325 aa1.53□□□□□ -2.16
PRPF39-208ENST00000554785 CLTBP09497 229 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms