RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TTC39CQ8N584 583 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TSPAN17Q96FV3 270 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 VPS33BQ9H267 617 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ALG9Q9H6U8 611 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MKKSQ9NPJ1 570 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 VSX1Q9NZR4 365 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FANCMQ8IYD8 2048 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MYOM2P54296 1465 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CNOT3O75175 753 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FAM153BP0C7A2 387 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF605Q86T29 641 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ITIH5Q86UX2 942 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM126BQ8IUX1 230 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 BORCS8Q96FH0 119 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ABHD10Q9NUJ1 306 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GSKIPQ9P0R6 139 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF536O15090 1300 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PPW3 197 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PEX12O00623 359 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ASLP04424 464 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SLC35G4P0C7Q5 338 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RAB4AP20338 218 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 COMTP21964 271 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GGT5P36269 586 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 KCTD9Q7L273 389 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GPR65Q8IYL9 337 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CMTR2Q8IYT2 770 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GTPBP3Q969Y2 492 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PVALEFA0A1B0GWK0 134 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM24O15164 1050 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GDI1P31150 447 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 HSF5Q4G112 596 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GTF2IRD2BQ6EKJ0 949 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 XRRA1Q6P2D8 792 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GTF2IRD2Q86UP8 949 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TCEAL8Q8IYN2 117 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TDRD5Q8NAT2 981 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OR6N1Q8NGY5 312 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 IFT27Q9BW83 186 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CHID1Q9BWS9 393 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CLPTM1O96005 669 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LGALS2P05162 132 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SLC2A1P11166 492 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 AP3M2P53677 418 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RAB39AQ14964 217 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TMC3Q7Z5M5 1100 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 APLFQ8IW19 511 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GIMAP8Q8ND71 665 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GLIS3Q8NEA6 775 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OR5T2Q8NGG2 359 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CLEC4CQ8WTT0 213 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C19orf60Q96EN9 201 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 DPCDQ9BVM2 203 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 POLR1EQ9GZS1 481 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GRIP1Q9Y3R0 1128 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SHANK2Q9UPX8 1470 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEA13PA6NCF6 341 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 J3KRW8 73 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 RNASE1P07998 156 aaKnown RBP3.28□□□□□ -1.89
SYNE2-212ENST00000554584 SFNP31947 248 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 IRAK1P51617 712 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 SP2Q02086 613 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 EIF2B1Q14232 305 aaKnown RBP3.28□□□□□ -1.89
SYNE2-212ENST00000554584 PARP6Q2NL67 630 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 UBXN11Q5T124 520 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 CFAP77Q6ZQR2 320 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 GPSM1Q86YR5 675 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM145Q8NBT3 493 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 ASB8Q9H765 288 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 CATSPERBQ9H7T0 1116 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 TAS2R13Q9NYV9 303 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 PLEKHA6Q9Y2H5 1048 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 PCDHGC4Q9Y5F7 938 aa3.28□□□□□ -1.89
SYNE2-212ENST00000554584 NEO1Q92859 1461 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 EML1O00423 815 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 VILLO15195 856 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 GRM6O15303 877 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 OR1I1O60431 355 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 WARSP23381 471 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 HTR1BP28222 390 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ARL6IP4Q66PJ3 421 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CYB5D1Q6P9G0 228 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 GCNT7Q6ZNI0 430 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ARL6IP6Q8N6S5 226 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 SPATA4Q8NEY3 305 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 EFHD2Q96C19 240 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZFP3Q96NJ6 502 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 NPLQ9BXD5 320 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 POMKQ9H5K3 350 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 COQ3Q9NZJ6 369 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TBX20Q9UMR3 447 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CHD2O14647 1828 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC189A1A4V9 331 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ANXA2P2A6NMY6 339 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PLOD2O00469 737 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RECQL4O94761 1208 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TOX4O94842 621 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 LY86O95711 162 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CCL5P13501 91 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms