RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 GPT2Q8TD30 523 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SEC14L1Q92503 715 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SH3KBP1Q96B97 665 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 LURAP1Q96LR2 239 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 C9orf72Q96LT7 481 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 NSMCE3Q96MG7 304 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TGM7Q96PF1 710 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 BRD8Q9H0E9 1235 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 METTL5Q9NRN9 209 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TBC1D29Q9UFV1 150 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 TMEM59LQ9UK28 342 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 AJAP1Q9UKB5 411 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 G3BP2Q9UN86 482 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 KCNK6Q9Y257 313 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 HIF3AQ9Y2N7 669 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SONP18583 2426 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 SNRNP200O75643 2136 aaKnown RBP5.3□□□□□ -1.56
HOXB3-213ENST00000552000 ARID1AO14497 2285 aa5.3□□□□□ -1.56
HOXB3-213ENST00000552000 A0A0U1RQS6 177 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 GOLGA6L3A6NEY3 463 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 FOXN3O00409 490 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 TRAFD1O14545 582 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CREB3O43889 395 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 PALMO75781 387 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 RASSF9O75901 435 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SMNDC1O75940 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SMC2O95347 1197 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 ASMTLO95671 621 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SOD1P00441 154 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 FGF5P12034 268 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 ACP5P13686 325 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 AMD1P17707 334 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 TNFAIP3P21580 790 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 TEAD1P28347 426 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CDC25BP30305 580 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 VIPR1P32241 457 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CSNK1DP48730 415 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SCNN1BP51168 640 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 STX17P56962 302 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 YBEYP58557 167 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 RPS15P62841 145 aaKnown RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 POLR2LP62875 67 aaKnown RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 STIM1Q13586 685 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 PTPRRQ15256 657 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 ZRSR2Q15696 482 aaKnown RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 KYNUQ16719 465 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CCDC14Q49A88 953 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 FBLN7Q53RD9 439 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CACHD1Q5VU97 1274 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 FAM69BQ5VUD6 431 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 TAF3Q5VWG9 929 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 PWWP2BQ6NUJ5 590 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 TTI2Q6NXR4 508 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 IYDQ6PHW0 289 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 RFLNAQ6ZTI6 216 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CBLL1Q75N03 491 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CHST15Q7LFX5 561 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 HPS6Q86YV9 775 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 NELFBQ8WX92 580 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 RXFP2Q8WXD0 754 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 MR1Q95460 341 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SMARCE1Q969G3 411 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CCDC34Q96HJ3 373 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 DHTKD1Q96HY7 919 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CELF6Q96J87 481 aaKnown RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 FAM81BQ96LP2 452 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 GSDMAQ96QA5 445 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 HERPUD2Q9BSE4 406 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 GPR87Q9BY21 358 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 LACRTQ9GZZ8 138 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 EPB41L1Q9H4G0 881 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 PDFQ9HBH1 243 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 KCTD5Q9NXV2 234 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 GPR83Q9NYM4 423 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 OGFRQ9NZT2 677 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CPNE7Q9UBL6 633 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 APEX2Q9UBZ4 518 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 EGFL7Q9UHF1 273 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 ZNHIT2Q9UHR6 403 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 CD84Q9UIB8 345 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 OSGIN2Q9Y236 505 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 FARSAQ9Y285 508 aaKnown RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 NTNG1Q9Y2I2 539 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 PCYT1BQ9Y5K3 369 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 COPG1Q9Y678 874 aaKnown RBP5.29□□□□□ -1.56
HOXB3-213ENST00000552000 SLC30A1Q9Y6M5 507 aa5.29□□□□□ -1.56
HOXB3-213ENST00000552000 MPDZO75970 2070 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 KIR2DS5A0A0G2JLQ3 304 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 A0A0G2JNG1 304 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SSU72P8A0A1W2PR75 194 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 HEATR9A2RTY3 570 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 NPIPB15A6NHN6 443 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ARHGAP42A6NI28 874 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 WASH4PA8MWX3 477 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 KIR2DS3K7RE56 304 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms