RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DRG2P55039 364 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 GTF2H3Q13889 308 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 PDK2Q15119 407 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 CHRNA6Q15825 494 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 NADK2Q4G0N4 442 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 PAPD7Q5XG87 772 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 CPZQ66K79 652 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 CRYBG3Q68DQ2 2970 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 KMT5CQ86Y97 462 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 HDAC11Q96DB2 347 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF514Q96K75 400 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 SLC29A3Q9BZD2 475 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 GPR63Q9BZJ6 419 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 ING2Q9H160 280 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 MAGEE1Q9HCI5 957 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 LMBRD1Q9NUN5 540 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 DTLQ9NZJ0 730 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 SEMA5BQ9P283 1151 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 SHOC2Q9UQ13 582 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF451Q9Y4E5 1061 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 PCDHGB7Q9Y5F8 929 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 DOPEY1Q5JWR5 2465 aa13.92□□□□□ -0.18
CHMP1A-210ENST00000551981 CELSR2Q9HCU4 2923 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 HIVEP3Q5T1R4 2406 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 LRBAP50851 2863 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 IGHV5-51A0A0C4DH38 117 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 KCNJ13O60928 360 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 CPNE3O75131 537 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 SEMA7AO75326 666 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 MTX2O75431 263 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 SORBS2O94875 1100 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 FOLR1P15328 257 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 VARSP26640 1264 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 GJC1P36383 396 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 CCL11P51671 97 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 ARSEP51690 589 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 RPS18P62269 152 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 CHAF1BQ13112 559 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 KCNAB1Q14722 419 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 FAM199XQ6PEV8 388 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 HPS6Q86YV9 775 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 TRAPPC5Q8IUR0 188 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF547Q8IVP9 402 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 EID2BQ96D98 161 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 TTC25Q96NG3 672 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 SRPK1Q96SB4 655 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 NAT10Q9H0A0 1025 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 THAP2Q9H0W7 228 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 MLXIPLQ9NP71 852 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 FGF21Q9NSA1 209 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 TRIM10Q9UDY6 481 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 FARSAQ9Y285 508 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 ZNF711Q9Y462 761 aa13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 BZW2Q9Y6E2 419 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-210ENST00000551981 KCNK1O00180 336 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 DPM1O60762 260 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 CYP1A2P05177 515 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 PIRTP0C851 137 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 EBLN1P0CF75 366 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 FECHP22830 423 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 IFI35P80217 286 aaPredicted RBP13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 HSD11B2P80365 405 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 GBE1Q04446 702 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 IL10RAQ13651 578 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 PLCL1Q15111 1095 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 INPP5JQ15735 1006 aaPredicted RBP13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 DNTTIP2Q5QJE6 756 aaKnown RBP13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 TMC3Q7Z5M5 1100 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 OR8K5Q8NH50 307 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 GDAP1Q8TB36 358 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 LRRN4Q8WUT4 740 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 MR1Q95460 341 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 VPS35Q96QK1 796 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 TRIB3Q96RU7 358 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 RUFY1Q96T51 708 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 CD180Q99467 661 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 SLAMF7Q9NQ25 335 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
CHMP1A-210ENST00000551981 MED13Q9UHV7 2174 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 UBA6A0AVT1 1052 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 A1L4Q6 167 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 TLCD2A6NGC4 264 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 SCRG1O75711 98 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 KLK3P07288 261 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 BPIP17213 487 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 LPOP22079 712 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 GSDMDP57764 484 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 PPP1CAP62136 330 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 TUBB4BP68371 445 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 CDK18Q07002 472 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 TUBB2AQ13885 445 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 ATP13A4Q4VNC1 1196 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 TMTC4Q5T4D3 741 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 IZUMO3Q5VZ72 239 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 CCDC70Q6NSX1 233 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 JMJD6Q6NYC1 403 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 NT5DC3Q86UY8 548 aa13.89□□□□□ -0.19
CHMP1A-210ENST00000551981 AMZ2Q86W34 360 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms