RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 MTX2O75431 263 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 RECKO95980 971 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 FGF5P12034 268 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 HMGCLP35914 325 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 OR8K1Q8NGG5 319 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 SLC35G2Q8TBE7 412 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 ELMO2Q96JJ3 720 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 FCRL4Q96PJ5 515 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 GLOD4Q9HC38 313 aa22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 DDX56Q9NY93 547 aaKnown RBP22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 MRPS18BQ9Y676 258 aaKnown RBP22.67■■□□□ 1.22
SMARCD1-209ENST00000550477 DOPEY2Q9Y3R5 2298 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 SSU72P8A0A1W2PR75 194 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 SYCE3A1L190 88 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 MTSS1O43312 755 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 PMPCBO75439 489 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 SPAG6O75602 509 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 MT-CYBP00156 380 aaPredicted RBP22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 LEPRP48357 1165 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 NR2C2P49116 596 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 ARL4DP49703 201 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 DRG2P55039 364 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 SH3BP2P78314 561 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 TRIM14Q14142 442 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 GPR18Q14330 331 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 LRRC38Q5VT99 294 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 TCTN3Q6NUS6 607 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 FAM92BQ6ZTR7 304 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 AMZ2Q86W34 360 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 ATCAYQ86WG3 371 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 KLHL6Q8WZ60 621 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 UBXN4Q92575 508 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 PACSIN1Q9BY11 444 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 HACD3Q9P035 362 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 ANKMY1Q9P2S6 941 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 TRIM10Q9UDY6 481 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 FAM153AQ9UHL3 310 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 RARRES3Q9UL19 164 aa22.66■■□□□ 1.22
SMARCD1-209ENST00000550477 PIPSLA2A3N6 862 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 OR52A4PA6NMU1 304 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 KRT1P04264 644 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 NELFEP18615 380 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 SLC1A1P43005 524 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 ACY1Q03154 408 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 TFDP2Q14188 446 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 IGFBP7Q16270 282 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 LDLRAP1Q5SW96 308 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 ATP1A1-AS1Q5TC04 95 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 SIDT2Q8NBJ9 832 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 SPATA22Q8NHS9 363 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 DTX3LQ8TDB6 740 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 TADA1Q96BN2 335 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 OLFM3Q96PB7 478 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 TWSG1Q9GZX9 223 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 BPIFA1Q9NP55 256 aa22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 DNMT3AQ9Y6K1 912 aaPredicted RBP22.65■■□□□ 1.22
SMARCD1-209ENST00000550477 GOLGA6L3A6NEY3 463 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 C21orf140B9A014 251 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 CREG1O75629 220 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 RFPL1O75677 317 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 NTRK1P04629 796 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 BRAFP15056 766 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 ZNF28P17035 718 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 DYNLT1P63172 113 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 PDE1BQ01064 536 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 SRSF1Q07955 248 aaKnown RBP eCLIP22.64■■□□□ 1.217e-6■□□□□ 10.7
SMARCD1-209ENST00000550477 ITGA9Q13797 1035 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 PPP2R5EQ16537 467 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 ATP13A5Q4VNC0 1218 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 ZNF547Q8IVP9 402 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 RHOT1Q8IXI2 618 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 TFB1MQ8WVM0 346 aaKnown RBP22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 RSC1A1Q92681 617 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 RNF25Q96BH1 459 aaPredicted RBP22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 TEKT5Q96M29 485 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 CCDC42Q96M95 316 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 TP53TG5Q9Y2B4 290 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 PCDHGA6Q9Y5G7 932 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 MAST4O15021 2626 aa22.64■■□□□ 1.21
SMARCD1-209ENST00000550477 PTPN13Q12923 2485 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 CDC14CA4D256 554 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 C3orf70A6NLC5 250 aaPredicted RBP22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 CYSRT1A8MQ03 144 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 EPOP01588 193 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 F8A1P23610 371 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 DNASE1L3Q13609 305 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 PLCL1Q15111 1095 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 NPNTQ6UXI9 565 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 KMT5CQ86Y97 462 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 BEND7Q8N7W2 519 aaPredicted RBP22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 LHX9Q9NQ69 397 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 UBP1Q9NZI7 540 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 MAN2B2Q9Y2E5 1009 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 PKP3Q9Y446 797 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 NBASA2RRP1 2371 aa22.63■■□□□ 1.21
SMARCD1-209ENST00000550477 CBFA2T2O43439 604 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 KIF1CO43896 1103 aaKnown RBP22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 FECHP22830 423 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 SPAM1P38567 509 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms