RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 MRPS18BQ9Y676 258 aaKnown RBP13.88□□□□□ -0.19
DDX11-228ENST00000545115 CYSRT1A8MQ03 144 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 CBFA2T2O43439 604 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 KCNJ13O60928 360 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 NDUFA10O95299 355 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 F8A1P23610 371 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 DLSTP36957 453 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 HALP42357 657 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 TNNT3P45378 269 aaPredicted RBP13.87□□□□□ -0.19
DDX11-228ENST00000545115 TMEM115Q12893 351 aaPredicted RBP13.87□□□□□ -0.19
DDX11-228ENST00000545115 PRKD1Q15139 912 aaPredicted RBP13.87□□□□□ -0.19
DDX11-228ENST00000545115 ATP1A1-AS1Q5TC04 95 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 CACHD1Q5VU97 1274 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 ZDHHC20Q5W0Z9 365 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 CYB5D1Q6P9G0 228 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 MFSD7Q6UXD7 560 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 RASGRP3Q8IV61 690 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 BRSK1Q8TDC3 778 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
DDX11-228ENST00000545115 STAMBPL1Q96FJ0 436 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 ZDHHC12Q96GR4 267 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 ABHD17AQ96GS6 310 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 CCDC42Q96M95 316 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 ZCCHC2Q9C0B9 1178 aaKnown RBP13.87□□□□□ -0.19
DDX11-228ENST00000545115 RAB33BQ9H082 229 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 ZNF71Q9NQZ8 489 aaPredicted RBP13.87□□□□□ -0.19
DDX11-228ENST00000545115 SPTLC3Q9NUV7 552 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 EPHA6Q9UF33 1036 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 FAM153AQ9UHL3 310 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 TMPRSS11EQ9UL52 423 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
DDX11-228ENST00000545115 HECTD1Q9ULT8 2610 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 LOC285095A0A1B0GVY8 99 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 SPOPO43791 374 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 KIF1CO43896 1103 aaKnown RBP13.86□□□□□ -0.19
DDX11-228ENST00000545115 KIAA0754O94854 1291 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 TPM1P09493 284 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 FGF5P12034 268 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 TNNT1P13805 278 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 CD68P34810 354 aaPredicted RBP13.86□□□□□ -0.19
DDX11-228ENST00000545115 SPAM1P38567 509 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 TFDP2Q14188 446 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
DDX11-228ENST00000545115 LACTB2Q53H82 288 aaPredicted RBP13.86□□□□□ -0.19
DDX11-228ENST00000545115 IRGCQ6NXR0 463 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 PPP1R3BQ86XI6 285 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 GALNT6Q8NCL4 622 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 KLHL6Q8WZ60 621 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 ELMO2Q96JJ3 720 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 CHP1Q99653 195 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 NHEJ1Q9H9Q4 299 aaPredicted RBP13.86□□□□□ -0.19
DDX11-228ENST00000545115 IL26Q9NPH9 171 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
DDX11-228ENST00000545115 SAE1Q9UBE0 346 aaPredicted RBP13.86□□□□□ -0.19
DDX11-228ENST00000545115 TRIM10Q9UDY6 481 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 LNPEPQ9UIQ6 1025 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 WDR37Q9Y2I8 494 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 KCNMB2Q9Y691 235 aa13.86□□□□□ -0.19
DDX11-228ENST00000545115 ZNF106Q9H2Y7 1883 aaKnown RBP13.86□□□□□ -0.19
DDX11-228ENST00000545115 MTSS1O43312 755 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 MFAP3LO75121 409 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 EPOP01588 193 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 NELFEP18615 380 aaKnown RBP13.85□□□□□ -0.19
DDX11-228ENST00000545115 NFKB1P19838 968 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 CDKN2BP42772 138 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 WNT3AP56704 352 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 DMPKQ09013 629 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 WASHC5Q12768 1159 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 NOMO1Q15155 1222 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 KLHL35Q6PF15 583 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 KDELC1Q6UW63 502 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 FAM92BQ6ZTR7 304 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 GLT6D1Q7Z4J2 308 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 AMZ2Q86W34 360 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 TTC30BQ8N4P2 665 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 DDHD1Q8NEL9 900 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 RNF31Q96EP0 1072 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 PDE7BQ9NP56 450 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 HACD3Q9P035 362 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 KLHL8Q9P2G9 620 aaPredicted RBP13.85□□□□□ -0.19
DDX11-228ENST00000545115 KCND3Q9UK17 655 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 POLHQ9Y253 713 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
DDX11-228ENST00000545115 UBR5O95071 2799 aaPredicted RBP13.84□□□□□ -0.19
DDX11-228ENST00000545115 GLYATL1P3A0A0U1RQE8 302 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 CST8O60676 142 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 SPAG6O75602 509 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 MT-ND3P03897 115 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 CCNYL3P0C7X3 344 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 PECAM1P16284 738 aaPredicted RBP13.84□□□□□ -0.19
DDX11-228ENST00000545115 HLA-DPA1P20036 260 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 COMTP21964 271 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 FECHP22830 423 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 FOXK1P85037 733 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 ITGA9Q13797 1035 aa13.84□□□□□ -0.19
DDX11-228ENST00000545115 ERV3-1Q14264 604 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms