RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SERINC3Q13530 473 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SPATS1Q496A3 300 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PIK3R6Q5UE93 754 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FAM171BQ6P995 826 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PRSS55Q6UWB4 352 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 LINGO4Q6UY18 593 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CHST9Q7L1S5 443 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 MRPL10Q7Z7H8 261 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 SCML4Q8N228 414 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 NRG4Q8WWG1 115 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 IL12RB2Q99665 862 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PKP2Q99959 881 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TMEM175Q9BSA9 504 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 AARSD1Q9BTE6 412 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 PCDHAC1Q9H158 963 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CXCL16Q9H2A7 254 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 EIF2B4Q9UI10 523 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 BTBD3Q9Y2F9 522 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FCF1Q9Y324 198 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 USP3Q9Y6I4 520 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SQORQ9Y6N5 450 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FAM234BA2RU67 622 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PRMT5O14744 637 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 SCAMP3O14828 347 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 TULP3O75386 442 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 OR4F21O95013 312 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ESR1P03372 595 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 HOXB6P17509 224 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 HDCP19113 662 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 GMPRP36959 345 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ITGA1P56199 1179 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 DLG1Q12959 904 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ACOX1Q15067 660 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SIX5Q8N196 739 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FBXO27Q8NI29 283 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ENKURQ8TC29 256 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TPD52L3Q96J77 140 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SPATA17Q96L03 361 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CHID1Q9BWS9 393 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CCSER2Q9H7U1 834 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 WDR6Q9NNW5 1121 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 IGSF5Q9NSI5 407 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TMEM161AQ9NX61 479 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CORO2BQ9UQ03 480 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 MYADML2A6NDP7 307 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SNPHO15079 494 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TSC22D2O75157 780 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CNTN5O94779 1100 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SERPIND1P05546 499 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 POLR2EP19388 210 aaKnown RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 CTC1Q2NKJ3 1217 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ZIK1Q3SY52 487 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 TIMM50Q3ZCQ8 353 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FBXO48Q5FWF7 155 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PDZK1Q5T2W1 519 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TRIQKQ629K1 86 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 GLYATQ6IB77 296 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CERS6Q6ZMG9 384 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 GCNT7Q6ZNI0 430 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SERINC5Q86VE9 423 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SERPINA9Q86WD7 417 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 YAF2Q8IY57 180 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 ZNF557Q8N988 423 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 ATG16L2Q8NAA4 619 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PDPRQ8NCN5 879 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PLEKHG4BQ96PX9 1271 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PAAF1Q9BRP4 392 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 OSBPL6Q9BZF3 934 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TMEM165Q9HC07 324 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 STOML2Q9UJZ1 356 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 RPS6KA6Q9UK32 745 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 KCTD3Q9Y597 815 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 AQP12BA6NM10 295 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 C9JVG2 144 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 M0QZQ0 153 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PRAMEF1O95521 474 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FTH1P02794 183 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CD1DP15813 335 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TALDO1P37837 337 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 MTHFRP42898 656 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CNTN1Q12860 1018 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 TTC23Q5W5X9 447 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CYP4V2Q6ZWL3 525 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 BEND5Q7L4P6 421 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 AQP12AQ8IXF9 295 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 FBXO22Q8NEZ5 403 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 OR6K2Q8NGY2 324 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 B3GALT6Q96L58 329 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 OR52E6Q96RD3 313 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 LRTM1Q9HBL6 345 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 KCTD5Q9NXV2 234 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CACNA2D2Q9NY47 1150 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 SMPD3Q9NY59 655 aaPredicted RBP5.73□□□□□ -1.49
VPS50-220ENST00000544910 USE1Q9NZ43 259 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 PCDHGC4Q9Y5F7 938 aa5.73□□□□□ -1.49
VPS50-220ENST00000544910 CCDC189A1A4V9 331 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 EME2A4GXA9 379 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 E7ENX8 843 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 SDHDO14521 159 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms