RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ZNF514Q96K75 400 aaPredicted RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 LINC00615Q96LM1 132 aaPredicted RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 BIRC8Q96P09 236 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 CYTH2Q99418 400 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 ZDHHC5Q9C0B5 715 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 OR2AG1Q9H205 316 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 MRPL40Q9NQ50 206 aaKnown RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 SLC17A6Q9P2U8 582 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 KLQ9UEF7 1012 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 KLF15Q9UIH9 416 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 GMEB2Q9UKD1 530 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PCDHB1Q9Y5F3 818 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PCYT1BQ9Y5K3 369 aaPredicted RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 PSAT1Q9Y617 370 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 DNMT3AQ9Y6K1 912 aaPredicted RBP12.91□□□□□ -0.34
DDX11-227ENST00000544652 PRSS21Q9Y6M0 314 aa12.91□□□□□ -0.34
DDX11-227ENST00000544652 CUL9Q8IWT3 2517 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 QSOX1O00391 747 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 GRID2O43424 1007 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 DFNA5O60443 496 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 HAUS5O94927 633 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 RASGRP1O95267 797 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 ESR1P03372 595 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 CFIP05156 583 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 ZNF806P0C7X5 589 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 HSD17B3P37058 310 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 RXRGP48443 463 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 BLKP51451 505 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 HK3P52790 923 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 CTSCP53634 463 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 IRX4P78413 519 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 PPARDQ03181 441 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 ILF2Q12905 390 aaKnown RBP12.9□□□□□ -0.34
DDX11-227ENST00000544652 EFTUD2Q15029 972 aaKnown RBP eCLIP12.9□□□□□ -0.343e-6■■■■□ 25.6
DDX11-227ENST00000544652 DOK6Q6PKX4 331 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 TMEM220Q6QAJ8 160 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 IL27RAQ6UWB1 636 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 LRRTM4Q86VH4 590 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 CLDN19Q8N6F1 224 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 TSACCQ96A04 125 aaPredicted RBP12.9□□□□□ -0.34
DDX11-227ENST00000544652 SGF29Q96ES7 293 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 CPNE1Q99829 537 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 FBXO6Q9NRD1 293 aaPredicted RBP12.9□□□□□ -0.34
DDX11-227ENST00000544652 TRNAU1APQ9NX07 287 aaKnown RBP12.9□□□□□ -0.34
DDX11-227ENST00000544652 FETUBQ9UGM5 382 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 CORO1CQ9ULV4 474 aaPredicted RBP12.9□□□□□ -0.34
DDX11-227ENST00000544652 SUFUQ9UMX1 484 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
DDX11-227ENST00000544652 ANKRD12Q6UB98 2062 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 C17orf113A0A1B0GUU1 675 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 OR2AG2A6NM03 316 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 KMOO15229 486 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 ERLIN1O75477 346 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 PIAS1O75925 651 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 TNFP01375 233 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 SYPP08247 313 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 F7P08709 466 aaPredicted RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 GSTM1P09488 218 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 NUDT17P0C025 328 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 GP5P40197 560 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 CSE1LP55060 971 aaKnown RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 NHLH1Q02575 133 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 GSTM4Q03013 218 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 SHBQ15464 509 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 ZNF658BQ4V348 819 aaPredicted RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 CTSL3PQ5NE16 218 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 BEND6Q5SZJ8 279 aaPredicted RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 STRA8Q7Z7C7 330 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 ZC3HC1Q86WB0 502 aaKnown RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 PHACTR4Q8IZ21 702 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 PPM1NQ8N819 430 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 UBLCP1Q8WVY7 318 aaPredicted RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 OR2M4Q96R27 311 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 ELF4Q99607 663 aaPredicted RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 RBBP8Q99708 897 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 DHRS4Q9BTZ2 278 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 NUSAP1Q9BXS6 441 aaKnown RBP12.89□□□□□ -0.35
DDX11-227ENST00000544652 CLPBQ9H078 707 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 RHOJQ9H4E5 214 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 LATS2Q9NRM7 1088 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 GULP1Q9UBP9 304 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 GNPTGQ9UJJ9 305 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
DDX11-227ENST00000544652 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 UBA6A0AVT1 1052 aaPredicted RBP12.88□□□□□ -0.35
DDX11-227ENST00000544652 KLHL33A6NCF5 533 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 F8W8V4 182 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 H3BM21 787 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 H3BMM5 538 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 KCNJ13O60928 360 aa12.88□□□□□ -0.35
DDX11-227ENST00000544652 OR56A5P0C7T3 313 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms