RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 ZDHHC20Q5W0Z9 365 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 NPNTQ6UXI9 565 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 PRSS42Q7Z5A4 293 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 PPP1R3BQ86XI6 285 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 ZNF547Q8IVP9 402 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 RHOT2Q8IXI1 618 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 SPATA22Q8NHS9 363 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 RSC1A1Q92681 617 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 TADA1Q96BN2 335 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 ZCCHC2Q9C0B9 1178 aaKnown RBP17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 BPIFA1Q9NP55 256 aa17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 DDX56Q9NY93 547 aaKnown RBP17.11■□□□□ 0.33
PPP1CA-210ENST00000542876 SSU72P8A0A1W2PR75 194 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 PRR19A6NJB7 356 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 MKRN2OSH3BPM6 223 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 KCNJ13O60928 360 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 TPM1P09493 284 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 TNNT1P13805 278 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 BRAFP15056 766 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 F8A1P23610 371 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 HMGCLP35914 325 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 FOXK1P85037 733 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 TMEM115Q12893 351 aaPredicted RBP17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 KLRB1Q12918 225 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 TRIM14Q14142 442 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 ERV3-1Q14264 604 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 ATP13A5Q4VNC0 1218 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 KLHL35Q6PF15 583 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 FAM92BQ6ZTR7 304 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 RNF25Q96BH1 459 aaPredicted RBP17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 RNF31Q96EP0 1072 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 PDE7BQ9NP56 450 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 UBP1Q9NZI7 540 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 EPHA6Q9UF33 1036 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 FAM153AQ9UHL3 310 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 PADI1Q9ULC6 663 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 POLHQ9Y253 713 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 KCNMB2Q9Y691 235 aa17.1■□□□□ 0.33
PPP1CA-210ENST00000542876 AURKAO14965 403 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 KIF1CO43896 1103 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 SPAG6O75602 509 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 FGF5P12034 268 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 SLC1A1P43005 524 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 NR2C2P49116 596 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 UBAP2LQ14157 1087 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 TFDP2Q14188 446 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 IGFBP7Q16270 282 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 PPP2R5EQ16537 467 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 ASTE1Q2TB18 679 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 KHDC1Q4VXA5 237 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 B4GALNT4Q76KP1 1039 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 AMZ2Q86W34 360 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 RHOT1Q8IXI2 618 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 TFB1MQ8WVM0 346 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 KLHL6Q8WZ60 621 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 TEKT5Q96M29 485 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 CCDC42Q96M95 316 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 TWSG1Q9GZX9 223 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 RAB33BQ9H082 229 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 SPO11Q9Y5K1 396 aa17.09■□□□□ 0.33
PPP1CA-210ENST00000542876 PIPSLA2A3N6 862 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 CDC14CA4D256 554 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 MTSS1O43312 755 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 NELFEP18615 380 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 PTPN3P26045 913 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 ARL4DP49703 201 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 PLCL1Q15111 1095 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 LDLRAP1Q5SW96 308 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 C11orf96Q7Z7L8 435 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 TEX19Q8NA77 164 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 SIDT2Q8NBJ9 832 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 UBXN4Q92575 508 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 HACD3Q9P035 362 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 ANKMY1Q9P2S6 941 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 RARRES3Q9UL19 164 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 TP53TG5Q9Y2B4 290 aa17.08■□□□□ 0.32
PPP1CA-210ENST00000542876 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 CBFA2T2O43439 604 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 SPOPO43791 374 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 RFPL1O75677 317 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 POP7O75817 140 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 FECHP22830 423 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 SPAM1P38567 509 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 WNT3AP56704 352 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 SRSF1Q07955 248 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 TUBB3Q13509 450 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 DNASE1L3Q13609 305 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 PRKD1Q15139 912 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 TCTN3Q6NUS6 607 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 SLC25A41Q8N5S1 370 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 DTX3LQ8TDB6 740 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 SEC14L1Q92503 715 aa17.07■□□□□ 0.32
PPP1CA-210ENST00000542876 IL26Q9NPH9 171 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms