RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CTSCP53634 463 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 MRPS34P82930 218 aaKnown RBP3.35□□□□□ -1.87
MDM2-227ENST00000540709 MED22Q15528 200 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 TBCEQ15813 527 aaPredicted RBP3.35□□□□□ -1.87
MDM2-227ENST00000540709 GORABQ5T7V8 394 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 SEPT14Q6ZU15 432 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 Q75L30 129 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 TSPYL6Q8N831 410 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 ETNPPLQ8TBG4 499 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 TAF15Q92804 592 aaKnown RBP eCLIP3.35□□□□□ -1.87
MDM2-227ENST00000540709 TMEM143Q96AN5 459 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 PERPQ96FX8 193 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 EGLN2Q96KS0 407 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 MAP7D2Q96T17 732 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 SLX1AQ9BQ83 275 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 RHNO1Q9BSD3 238 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 STRA6Q9BX79 667 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 EPB41L5Q9HCM4 733 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 UBN1Q9NPG3 1134 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 SMC4Q9NTJ3 1288 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 FBXW11Q9UKB1 542 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 KCNJ14Q9UNX9 436 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 YIPF1Q9Y548 306 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 KCNE2Q9Y6J6 123 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 STK36Q9NRP7 1315 aa3.35□□□□□ -1.87
MDM2-227ENST00000540709 TMEM189-UBE2V1I3L0A0 370 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 WISP2O76076 250 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 ANXA7P20073 488 aaKnown RBP3.34□□□□□ -1.87
MDM2-227ENST00000540709 HRH2P25021 359 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 NFKBIAP25963 317 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 NR2C2P49116 596 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 CLK1P49759 484 aaKnown RBP3.34□□□□□ -1.87
MDM2-227ENST00000540709 CCR9P51686 369 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 TAS2R40P59535 323 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 RPS3AP61247 264 aaKnown RBP3.34□□□□□ -1.87
MDM2-227ENST00000540709 IRX1P78414 480 aaPredicted RBP3.34□□□□□ -1.87
MDM2-227ENST00000540709 KCNJ10P78508 379 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 ZBED6P86452 979 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 SPOCK1Q08629 439 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 LRMPQ12912 555 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 UBE2V1Q13404 147 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 ARHGEF16Q5VV41 709 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 LCN10Q6JVE6 187 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 PTOV1Q86YD1 416 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 PDILTQ8N807 584 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 DDHD1Q8NEL9 900 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 TMEM190Q8WZ59 177 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 ZNF653Q96CK0 615 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 PDZD7Q9H5P4 517 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 MYH16Q9H6N6 1097 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 IRAK4Q9NWZ3 460 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 MTMR10Q9NXD2 777 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 PDP2Q9P2J9 529 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 UBA2Q9UBT2 640 aaPredicted RBP3.34□□□□□ -1.87
MDM2-227ENST00000540709 ACAD8Q9UKU7 415 aa3.34□□□□□ -1.87
MDM2-227ENST00000540709 J3QR06 171 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 PLK4O00444 970 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 GPC4O75487 556 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 HIST1H2ABP04908 130 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 HMBSP08397 361 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 HSPA1AP0DMV8 641 aaKnown RBP3.33□□□□□ -1.88
MDM2-227ENST00000540709 HSPA1BP0DMV9 641 aaKnown RBP3.33□□□□□ -1.88
MDM2-227ENST00000540709 KRT5P13647 590 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 ZNF26P17031 533 aaPredicted RBP3.33□□□□□ -1.88
MDM2-227ENST00000540709 CKMT2P17540 419 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 HIST1H2ADP20671 130 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 MSH2P43246 934 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 CDH11P55287 796 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 TFAP4Q01664 338 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 ADIPOQQ15848 244 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 MEP1AQ16819 746 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 MFSD6Q6ZSS7 791 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 HIST3H2AQ7L7L0 130 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 DNAJC22Q8N4W6 341 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 GCSAMQ8N6F7 178 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 TRIM58Q8NG06 486 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 NUDCD1Q96RS6 583 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 SEC62Q99442 399 aaKnown RBP3.33□□□□□ -1.88
MDM2-227ENST00000540709 MAGIXQ9H6Y5 334 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 JMJD4Q9H9V9 463 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 CACNG5Q9UF02 275 aa3.33□□□□□ -1.88
MDM2-227ENST00000540709 DBNLQ9UJU6 430 aaKnown RBP3.33□□□□□ -1.88
MDM2-227ENST00000540709 A0A1W2PQF6 199 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 MAGEB17A8MXT2 336 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 MAP2K7O14733 419 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 ZNF500O60304 480 aaPredicted RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 ZNF217O75362 1048 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 CRLF1O75462 422 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 RTN3O95197 1032 aaPredicted RBP3.32□□□□□ -1.88
MDM2-227ENST00000540709 PLA2G4BP0C869 781 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 IGHV4-38-2P0DP08 117 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 CEACAM1P13688 526 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 CBLP22681 906 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 PSMC4P43686 418 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 PPP2R2BQ00005 443 aa3.32□□□□□ -1.88
MDM2-227ENST00000540709 G3BP1Q13283 466 aaKnown RBP eCLIP3.32□□□□□ -1.88
MDM2-227ENST00000540709 ITGA9Q13797 1035 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms