RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 NAALAD2Q9Y3Q0 740 aa9.39□□□□□ -0.91
CTNNA1-243ENST00000540387 PSAT1Q9Y617 370 aa9.39□□□□□ -0.91
CTNNA1-243ENST00000540387 KCNE2Q9Y6J6 123 aa9.39□□□□□ -0.91
CTNNA1-243ENST00000540387 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
CTNNA1-243ENST00000540387 A0A087WZ62 844 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MBLAC1A4D2B0 266 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TRPC5OSA6NMA1 111 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 APOC4-APOC2K7ER74 178 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PLD2O14939 933 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ARHGEF9O43307 516 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 CDK14O94921 469 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 APOC2P02655 101 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 EDN1P05305 212 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 KRT19P08727 400 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 DDCP20711 480 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 KDELR1P24390 212 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 UGT2B10P36537 528 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 IL12RB1P42701 662 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 GPR85P60893 370 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ZNF45Q02386 682 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 GCNT1Q02742 428 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 COX10Q12887 443 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 SLAMF1Q13291 335 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ZNF267Q14586 743 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 STARD3Q14849 445 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 CTU2Q2VPK5 515 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PLA2G4EQ3MJ16 856 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 AGKQ53H12 422 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 RAP1GAP2Q684P5 730 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FAM45BPQ6NSW5 357 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 C8orf82Q6P1X6 216 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 CMC1Q7Z7K0 106 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PAF1Q8N7H5 531 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 OR7D4Q8NG98 312 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FAM45AQ8TCE6 357 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 SLC7A6Q92536 515 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ELMO1Q92556 727 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 RORBQ92753 470 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 RPL3LQ92901 407 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 NEDD4LQ96PU5 975 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TBCBQ99426 244 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FDXACB1Q9BRP7 624 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FTHL17Q9BXU8 183 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 BEX2Q9BXY8 128 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PRRG3Q9BZD7 231 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 B3GNT2Q9NY97 397 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 CCDC167Q9P0B6 97 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PAK5Q9P286 719 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 VTI1BQ9UEU0 232 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ZNF639Q9UID6 485 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 GINS2Q9Y248 185 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ZFC3H1O60293 1989 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 METTL15A6NJ78 407 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 I3L521 148 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 H2AFYO75367 372 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MAP3K6O95382 1288 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MT-ND1P03886 318 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TRAPPC2P0DI81 140 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TRAPPC2BP0DI82 140 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FSHRP23945 695 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 DNAJB1P25685 340 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ACVR2AP27037 513 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 LIG4P49917 911 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ARHGDIAP52565 204 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ACLYP53396 1101 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 BNC1Q01954 994 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FAPQ12884 760 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 EFR3AQ14156 821 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 FASTKQ14296 549 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MAPRE2Q15555 327 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 SMAD1Q15797 465 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TAZQ16635 292 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 GPAT3Q53EU6 434 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TPRG1LQ5T0D9 272 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ENOSF1Q7L5Y1 443 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 NRARPQ7Z6K4 114 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 CDH24Q86UP0 819 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 RAB43Q86YS6 212 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 STON2Q8WXE9 905 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TESCQ96BS2 214 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 ZHX1-C8orf76Q96EF9 292 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 C1orf74Q96LT6 269 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 DEFB118Q96PH6 123 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 RNF208Q9H0X6 261 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MINDY3Q9H8M7 445 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 LTB4R2Q9NPC1 389 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 EHD3Q9NZN3 535 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 BTBD3Q9Y2F9 522 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 PCDHGB6Q9Y5F9 930 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 TTC24A2A3L6 582 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 MEIOCA2RUB1 952 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 H0Y626 953 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 NME4O00746 187 aa9.38□□□□□ -0.91
CTNNA1-243ENST00000540387 AKR7A2O43488 359 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms