RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZNF805Q5CZA5 627 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 COQ5Q5HYK3 327 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 ICE2Q659A1 982 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SULT1C3Q6IMI6 304 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 OGFOD2Q6N063 350 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 HACD2Q6Y1H2 254 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 BNC2Q6ZN30 1099 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 RNF165Q6ZSG1 346 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 NEK10Q6ZWH5 1172 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SNX32Q86XE0 403 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.05□□□□□ -0.8
SPARC-209ENST00000539687 NRSN1Q8IZ57 195 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 PHTF2Q8N3S3 785 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 FBXW8Q8N3Y1 598 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 PCYOX1LQ8NBM8 494 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 OR2A12Q8NGT7 310 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 BPIFB1Q8TDL5 484 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 UCMAQ8WVF2 138 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 TWIST2Q8WVJ9 160 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 EID2BQ96D98 161 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 CATSPER2Q96P56 530 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 LENG8Q96PV6 779 aaPredicted RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 HGH1Q9BTY7 390 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 ZSCAN5AQ9BUG6 496 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 VCX3BQ9H321 246 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 EBF2Q9HAK2 575 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 SARS2Q9NP81 518 aaKnown RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 STX18Q9P2W9 335 aaKnown RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 COPG1Q9Y678 874 aaKnown RBP10.05□□□□□ -0.8
SPARC-209ENST00000539687 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
SPARC-209ENST00000539687 RANBP2P49792 3224 aaKnown RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 IGLV3-16A0A075B6K0 115 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 DYTNA2CJ06 578 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 A8MUI8 341 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 H0Y858 1186 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 PSMD12O00232 456 aaPredicted RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 CDC7O00311 574 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 GAPDHSO14556 408 aaPredicted RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 FFAR2O15552 330 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 BNIP3LO60238 219 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 KATNA1O75449 491 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 KRT34O76011 436 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 STAMBPO95630 424 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 FTH1P02794 183 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 PRSS56P0CW18 603 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 MPC1LP0DKB6 136 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 IDO1P14902 403 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 MSH3P20585 1137 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 ITGAXP20702 1163 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 CCR10P46092 362 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 KCNC1P48547 511 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 NUDT2P50583 147 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 MTTPP55157 894 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SH3BP2P78314 561 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SLC34A1Q06495 639 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 CAMK1Q14012 370 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 KPNB1Q14974 876 aaKnown RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 RBBP7Q16576 425 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 MMEL1Q495T6 779 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SPATS1Q496A3 300 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 PLEKHS1Q5SXH7 462 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 GPRC6AQ5T6X5 926 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 PRMT9Q6P2P2 845 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 PGM2L1Q6PCE3 622 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 GPRIN3Q6ZVF9 776 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 Q6ZVU0 165 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
SPARC-209ENST00000539687 DPPA4Q7L190 304 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 DSG4Q86SJ6 1040 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 ADGRG6Q86SQ4 1221 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 DEFB107AQ8IZN7 70 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 TRAM1L1Q8N609 369 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 POU5F2Q8N7G0 328 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 TRPC4APQ8TEL6 797 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 UBTD2Q8WUN7 234 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 EEF1AKMT1Q8WVE0 214 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 DLG3Q92796 817 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SMARCD2Q92925 531 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 ROPN1LQ96C74 230 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 PPP1R16AQ96I34 528 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 KLHL32Q96NJ5 620 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SHCBP1LQ9BZQ2 653 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 FAM83DQ9H4H8 585 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 TRPV4Q9HBA0 871 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 CD248Q9HCU0 757 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 EPS15L1Q9UBC2 864 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 B4GALT6Q9UBX8 382 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 SLC7A8Q9UHI5 535 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 CDH22Q9UJ99 828 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 PCTPQ9UKL6 214 aa10.04□□□□□ -0.8
SPARC-209ENST00000539687 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
SPARC-209ENST00000539687 A0A088AWK7 358 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 UBFD1O14562 309 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms