RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 RNGTTO60942 597 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 RPS6KA4O75676 772 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 UGT2B17O75795 530 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 AMHP03971 560 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CHRNGP07510 517 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 FGF4P08620 206 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 RBP1P09455 135 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 USP17L7P0C7H9 530 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 RAP2AP10114 183 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ITGAMP11215 1152 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PDGFRAP16234 1089 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ITGA2P17301 1181 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CTRB1P17538 263 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ITGB5P18084 799 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CHRM3P20309 590 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PRKACBP22694 351 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ADORA2AP29274 412 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 RCVRNP35243 200 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 MSX2P35548 267 aaPredicted RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 POLR2IP36954 125 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 GNPDA1P46926 289 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 EFNA5P52803 228 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 NAGLUP54802 743 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 UGT2B15P54855 530 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CDH13P55290 713 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ACTR2P61160 394 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 TGFB2P61812 414 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CTAG1AP78358 180 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP28-207ENST00000538475 ITPK1Q13572 414 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 POU6F1Q14863 301 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 POLD3Q15054 466 aaPredicted RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 NPTX1Q15818 432 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CPSF6Q16630 551 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP28-207ENST00000538475 ZNF404Q494X3 552 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ZFP69Q49AA0 526 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CDONQ4KMG0 1287 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CCDC58Q4VC31 144 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PPM1JQ5JR12 505 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 BRMS1LQ5PSV4 323 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP28-207ENST00000538475 TIGD3Q6B0B8 471 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CTRB2Q6GPI1 263 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ZCCHC8Q6NZY4 707 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 DENND1BQ6P3S1 775 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 NPNTQ6UXI9 565 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CYP2R1Q6VVX0 501 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 GK5Q6ZS86 529 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 RFPL4BQ6ZWI9 263 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 LARP4Q71RC2 724 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP28-207ENST00000538475 EFL1Q7Z2Z2 1120 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 R3HCC1LQ7Z5L2 792 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 SPATA19Q7Z5L4 167 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 GALNT7Q86SF2 657 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PDZD3Q86UT5 571 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PLCZ1Q86YW0 608 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CNTN4Q8IWV2 1026 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 RIMKLAQ8IXN7 391 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 UBQLNLQ8IYU4 475 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 CHCHD4Q8N4Q1 142 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CCDC185Q8N715 623 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PAF1Q8N7H5 531 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 POC5Q8NA72 575 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CHDHQ8NE62 594 aaPredicted RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 FLCNQ8NFG4 579 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 IL17RDQ8NFM7 739 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 MAGEE2Q8TD90 523 aaPredicted RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 STK35Q8TDR2 534 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 GIPC2Q8TF65 315 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 GPRASP2Q96D09 838 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 FBXL20Q96IG2 436 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 VPS39Q96JC1 886 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CDHR1Q96JP9 859 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 EGLN2Q96KS0 407 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 ZDHHC15Q96MV8 337 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 MUS81Q96NY9 551 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 FANCD2OSQ96PS1 177 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 VAT1Q99536 393 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 MSTO1Q9BUK6 570 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CHID1Q9BWS9 393 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 UGT2B28Q9BY64 529 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 SLIRPQ9GZT3 109 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 MKRN2Q9H000 416 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 FAM49AQ9H0Q0 323 aaPredicted RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 DUSP21Q9H596 190 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 TASP1Q9H6P5 420 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 NOL6Q9H6R4 1146 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 CASS4Q9NQ75 786 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 DDX4Q9NQI0 724 aaKnown RBP6.64□□□□□ -1.35
USP28-207ENST00000538475 SCN3BQ9NY72 215 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 GGA3Q9NZ52 723 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 DNAJB9Q9UBS3 223 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PCSK1NQ9UHG2 260 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 STOML2Q9UJZ1 356 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 C3orf18Q9UK00 162 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 PACSIN3Q9UKS6 424 aa6.64□□□□□ -1.35
USP28-207ENST00000538475 AURKCQ9UQB9 309 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms