RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TCRBV7S3A2A0A539 114 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 PDZK1P1A8MUH7 402 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 E7EVH7 732 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF185O15231 689 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 ZSCAN12O43309 604 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 MSH3P20585 1137 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 PSMA3P25788 255 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 PBLDP30039 288 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-206ENST00000536429 ACTN2P35609 894 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 SLC19A1P41440 591 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 GPR3P46089 330 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 LMAN1P49257 510 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 TERF1P54274 439 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 PDE1BQ01064 536 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 CDH17Q12864 832 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 NFE2L1Q14494 772 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 CLCA4Q14CN2 919 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 TBC1D25Q3MII6 688 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 C19orf48Q6RUI8 117 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 PPP1R21Q6ZMI0 780 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 GSTA5Q7RTV2 222 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 SNX20Q7Z614 316 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 LINC00523Q86TU6 105 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 NXPE1Q8N323 547 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 OR13J1Q8NGT2 312 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 MAIP1Q8WWC4 291 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 LIN37Q96GY3 246 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-206ENST00000536429 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF778Q96MU6 729 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 OSBPL9Q96SU4 736 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 SLC38A3Q99624 504 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 TBC1D10AQ9BXI6 508 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 SARS2Q9NP81 518 aaKnown RBP12.94□□□□□ -0.34
PRKDC-206ENST00000536429 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 CRLS1Q9UJA2 301 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 KIF26BQ2KJY2 2108 aa12.94□□□□□ -0.34
PRKDC-206ENST00000536429 ITPR1Q14643 2758 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 TRBV5-4A0A0C4DH59 114 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 KIR2DS5A0A0G2JLQ3 304 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 A0A0G2JNG1 304 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 IGHV5-10-1A0A0J9YXX1 117 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 ERI2A8K979 691 aaKnown RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 H7C0S8 307 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 KIR2DS3K7RE56 304 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 CPNE6O95741 557 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 ITGALP20701 1170 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 CCKBRP32239 447 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 HADHAP40939 763 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 VPS41P49754 854 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 KIR2DS5Q14953 304 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 C16orf72Q14CZ0 275 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 ZRANB3Q5FWF4 1079 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 PHF19Q5T6S3 580 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 ABRAXAS1Q6UWZ7 409 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 SLC9B2Q86UD5 537 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 AMZ2Q86W34 360 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 SERPINA9Q86WD7 417 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 LILRA3Q8N6C8 439 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 RCBTB1Q8NDN9 531 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 WDR36Q8NI36 951 aaKnown RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 STYXQ8WUJ0 223 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 PBKQ96KB5 322 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 CCDC74BQ96LY2 380 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 TMEM74Q96NL1 305 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 ZCCHC2Q9C0B9 1178 aaKnown RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 FAM8A1Q9UBU6 413 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 SLC30A1Q9Y6M5 507 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 LOC400499M0QZD8 3231 aa12.93□□□□□ -0.34
PRKDC-206ENST00000536429 SMG1Q96Q15 3661 aaKnown RBP12.93□□□□□ -0.34
PRKDC-206ENST00000536429 CCDC162PA2VCL2 907 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 PLD2O14939 933 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 KIF5CO60282 957 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 TNFSF15O95150 251 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ITIH1P19827 911 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 IDSP22304 550 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ACRV1P26436 265 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ITPKBP27987 946 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ETV5P41161 510 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 MAPK9P45984 424 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 SESN2P58004 480 aaPredicted RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 CRADDP78560 199 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 BASP1P80723 227 aaKnown RBP12.92□□□□□ -0.34
PRKDC-206ENST00000536429 DMPKQ09013 629 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 DBN1Q16643 649 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 BCL7AQ4VC05 210 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 TSTD2Q5T7W7 516 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 AGAP9Q5VTM2 703 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 WASH2PQ6VEQ5 465 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF534Q76KX8 674 aa12.92□□□□□ -0.34
PRKDC-206ENST00000536429 RAB11FIP2Q7L804 512 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms