RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 UGT1A3P35503 534 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 UGT1A5P35504 534 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 GP5P40197 560 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 NPTX2P47972 431 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 POLD2P49005 469 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 NUMBP49757 651 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 RPL14P50914 215 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 STAT5BP51692 787 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 ARPC4P59998 168 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 RPS3AP61247 264 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 ATP6V0D1P61421 351 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 PSMC1P62191 440 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 RPL7AP62424 266 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 RPL10AP62906 217 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 MPP1Q00013 466 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 GRSF1Q12849 480 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP28-202ENST00000535607 ITGA7Q13683 1181 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 FRG1Q14331 258 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 GRB14Q14449 540 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 TGFBIQ15582 683 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 INAVAQ3KP66 663 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 BOLA3Q53S33 107 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SPANXN3Q5MJ09 141 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 IL23RQ5VWK5 629 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 STEAP4Q687X5 459 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 LMBRD2Q68DH5 695 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 ITPRIPL1Q6GPH6 555 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 PPP4R4Q6NUP7 873 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 C17orf99Q6UX52 265 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SLC30A10Q6XR72 485 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 CDHR3Q6ZTQ4 885 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 NANOGNBQ7Z5D8 188 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SLC15A3Q8IY34 581 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 ZNF786Q8N393 782 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 KLHL36Q8N4N3 616 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 PCYOX1LQ8NBM8 494 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 ZSCAN18Q8TBC5 510 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 ZCCHC14Q8WYQ9 949 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 STARD8Q92502 1023 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SEPT8Q92599 483 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 USP6NLQ92738 828 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 GCDHQ92947 438 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 RANBP9Q96S59 729 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 ZNF347Q96SE7 839 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 UHRF1Q96T88 793 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 TBCBQ99426 244 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 CNPY3Q9BT09 278 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 ADI1Q9BV57 179 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SDCBP2Q9H190 292 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 FAM124BQ9H5Z6 455 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 UGT1A7Q9HAW7 530 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 UGT1A10Q9HAW8 530 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 UGT1A8Q9HAW9 530 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 ANLNQ9NQW6 1124 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 EIF2B3Q9NR50 452 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 PXMP2Q9NR77 195 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SPATA6Q9NWH7 488 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 RBAKQ9NYW8 714 aaPredicted RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 ADA2Q9NZK5 511 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 MAGEL2Q9UJ55 1249 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 AGO2Q9UKV8 859 aaKnown RBP6.57□□□□□ -1.36
USP28-202ENST00000535607 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 VWA7Q9Y334 891 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 RIPK3Q9Y572 518 aa6.57□□□□□ -1.36
USP28-202ENST00000535607 SH3D21A4FU49 640 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 TBKBP1A7MCY6 615 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 HACD1B0YJ81 288 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 CLDN25C9JDP6 229 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 CYB561D2O14569 222 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 AKAP10O43572 662 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 AVILO75366 819 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 GMNNO75496 209 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 GCATO75600 419 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 SRP72O76094 671 aaKnown RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 ALDH1A2O94788 518 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 KRT75O95678 551 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 TRUB2O95900 331 aaKnown RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 MYL3P08590 195 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 HOXC6P09630 235 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 ZNF26P17031 533 aaPredicted RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 AGXTP21549 392 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 PSMA4P25789 261 aaKnown RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 STT3AP46977 705 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 CCR3P51677 355 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 ZNF132P52740 706 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 THOP1P52888 689 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 RRADP55042 308 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 CDH6P55285 790 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 GJA9P57773 515 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 SLC25A11Q02978 314 aaKnown RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 ILF2Q12905 390 aaKnown RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 BNIP2Q12982 314 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 CRHR2Q13324 411 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 TOP3AQ13472 1001 aaPredicted RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 ATP1A4Q13733 1029 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 BMPR2Q13873 1038 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 BAATQ14032 418 aaPredicted RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 USP10Q14694 798 aaKnown RBP6.56□□□□□ -1.36
USP28-202ENST00000535607 RTP5Q14D33 572 aa6.56□□□□□ -1.36
USP28-202ENST00000535607 PCLAFQ15004 111 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms