RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	PRR19	A6NJB7	356 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	CHUK	O15111	745 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	KIF5C	O60282	957 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	CYP1A2	P05177	515 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	ACP5	P13686	325 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	NOP2	P46087	812 aa	Known RBP	11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	KLRB1	Q12918	225 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	MMRN1	Q13201	1228 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	DPYSL3	Q14195	570 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	KRT81	Q14533	505 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PDK2	Q15119	407 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	IGFBP7	Q16270	282 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	HADH	Q16836	314 aa	Known RBP	11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	DEFB109B	Q30KR1	87 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	LACTB2	Q53H82	288 aa	Predicted RBP	11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	NCBP2-AS2	Q69YL0	99 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PDPK2P	Q6A1A2	396 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	TCTN3	Q6NUS6	607 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	TMEM26	Q6ZUK4	368 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	KDELC2	Q7Z4H8	507 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PHYKPL	Q8IUZ5	450 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	UNC5B	Q8IZJ1	945 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	FAF2	Q96CS3	445 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PLEKHG4B	Q96PX9	1271 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF670	Q9BS34	389 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	MLPH	Q9BV36	600 aa	Predicted RBP	11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	ADGRE3	Q9BY15	652 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	TSGA10	Q9BZW7	698 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	TRIM39	Q9HCM9	518 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	LZTFL1	Q9NQ48	299 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PKD2L2	Q9NZM6	624 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	OGFR	Q9NZT2	677 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	ATXN10	Q9UBB4	475 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	KCNK6	Q9Y257	313 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PRKAB1	Q9Y478	270 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	PCDHB3	Q9Y5E6	796 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	RPS6KL1	Q9Y6S9	549 aa		11.38	□□□□□ -0.59
CTNND1-238	ENST00000534647	USP9Y	O00507	2555 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	DOPEY2	Q9Y3R5	2298 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	NBAS	A2RRP1	2371 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MYO1F	O00160	1098 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	KRT86	O43790	486 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MFSD11	O43934	449 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MMP2	P08253	660 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	CD48	P09326	243 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	PRKAR1A	P10644	381 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF8	P17098	575 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MX2	P20592	715 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	CASQ1	P31415	396 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	PPM1F	P49593	454 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	DCDC1	P59894	354 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	GNG11	P61952	73 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ETF1	P62495	437 aa	Known RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ABRAXAS1	Q6UWZ7	409 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	WASH2P	Q6VEQ5	465 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	SYT10	Q6XYQ8	523 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ATCAY	Q86WG3	371 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MAP7D3	Q8IWC1	876 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	RBM12B	Q8IXT5	1001 aa	Known RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	FAM26E	Q8N5C1	309 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	LPCAT1	Q8NF37	534 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MIB2	Q96AX9	1013 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	EID2B	Q96D98	161 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	PSMG3-AS1	Q96PY0	264 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZSCAN5A	Q9BUG6	496 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	TBC1D10A	Q9BXI6	508 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ULBP3	Q9BZM4	244 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	RAB33B	Q9H082	229 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	THAP2	Q9H0W7	228 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF768	Q9H5H4	540 aa	Known RBP	11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	WASH6P	Q9NQA3	447 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	PRDM8	Q9NQV8	689 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	RAD18	Q9NS91	495 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	EPHA6	Q9UF33	1036 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	ANAPC7	Q9UJX3	599 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	KCND3	Q9UK17	655 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MAN2B2	Q9Y2E5	1009 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	PCDHGA6	Q9Y5G7	932 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	COL12A1	Q99715	3063 aa		11.37	□□□□□ -0.59
CTNND1-238	ENST00000534647	MKRN2OS	H3BPM6	223 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SNX2	O60749	519 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	UBXN7	O94888	489 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC25A14	O95258	325 aa	Predicted RBP	11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	HLA-DQB2	P05538	268 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	FGF5	P12034	268 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	F8A1	P23610	371 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC19A1	P41440	591 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	VAV2	P52735	878 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	KIF5A	Q12840	1032 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	AGAP9	Q5VTM2	703 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	PRSS42	Q7Z5A4	293 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	TMC3	Q7Z5M5	1100 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	ADGRG6	Q86SQ4	1221 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	BPHL	Q86WA6	291 aa	Predicted RBP	11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	KCTD6	Q8NC69	237 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	KLHL6	Q8WZ60	621 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	HDAC11	Q96DB2	347 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms