RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ADGRG6Q86SQ4 1221 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 HPS6Q86YV9 775 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 PSTKQ8IV42 348 aaKnown RBP9.07□□□□□ -0.96
PACS1-214ENST00000533811 FCRL4Q96PJ5 515 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 CSPG4P5Q96PW8 444 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 MAP3K3Q99759 626 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 TRIM39Q9HCM9 518 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 RBM22Q9NW64 420 aaKnown RBP eCLIP9.07□□□□□ -0.96
PACS1-214ENST00000533811 MYO1AQ9UBC5 1043 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 EPHA6Q9UF33 1036 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 SEC16AO15027 2179 aa9.07□□□□□ -0.96
PACS1-214ENST00000533811 F8P00451 2351 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 POLQO75417 2590 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 SSU72P8A0A1W2PR75 194 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 TMEM191CA6NGB0 347 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
PACS1-214ENST00000533811 MFSD11O43934 449 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 CEACAM4O75871 244 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 PRLP01236 227 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 KLK3P07288 261 aaPredicted RBP9.06□□□□□ -0.96
PACS1-214ENST00000533811 PIRTP0C851 137 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 PRF1P14222 555 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 BRAFP15056 766 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 TCF4P15884 667 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 FERP16591 822 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 LPOP22079 712 aaPredicted RBP9.06□□□□□ -0.96
PACS1-214ENST00000533811 IDSP22304 550 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 HNRNPH3P31942 346 aaKnown RBP9.06□□□□□ -0.96
PACS1-214ENST00000533811 HALP42357 657 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 ZNF165P49910 485 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 VAV2P52735 878 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 ITGA1P56199 1179 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 ATP1A4Q13733 1029 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 LAMB3Q13751 1172 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 GALNT3Q14435 633 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 KRT81Q14533 505 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 IHHQ14623 411 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 DPYSL2Q16555 572 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 QPCTQ16769 361 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 PRAMEF17Q5VTA0 474 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 LCN10Q6JVE6 187 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 TRAPPC5Q8IUR0 188 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 RBM12BQ8IXT5 1001 aaKnown RBP9.06□□□□□ -0.96
PACS1-214ENST00000533811 TEX26Q8N6G2 289 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 GPR150Q8NGU9 434 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 LRRN4Q8WUT4 740 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 GLYATL1Q969I3 302 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 SGSM3Q96HU1 749 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 SLC41A2Q96JW4 573 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 RANBP9Q96S59 729 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 TIMM29Q9BSF4 260 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 ILKAPQ9H0C8 392 aaPredicted RBP9.06□□□□□ -0.96
PACS1-214ENST00000533811 CLSTN2Q9H4D0 955 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 SLC40A1Q9NP59 571 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 SOHLH2Q9NX45 425 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 PSMD13Q9UNM6 376 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 SHOC2Q9UQ13 582 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 ADGRG1Q9Y653 693 aa9.06□□□□□ -0.96
PACS1-214ENST00000533811 TLCD2A6NGC4 264 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 CDK14O94921 469 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 JCHAINP01591 159 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 HLA-DQB2P05538 268 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 CCDC172P0C7W6 258 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 RARAP10276 462 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 ATP1A3P13637 1013 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 VCLP18206 1134 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 CES1P23141 567 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GRNP28799 593 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 OTX2P32243 289 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GJC1P36383 396 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 CD86P42081 329 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GLRBP48167 497 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 ARCN1P48444 511 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 RRADP55042 308 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GSDMDP57764 484 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 RPL26P61254 145 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 TUBB4BP68371 445 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 HSD11B2P80365 405 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 UBXN1Q04323 297 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 NIPAL4Q0D2K0 466 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 TUBB2AQ13885 445 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GTF2H3Q13889 308 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 CCDC122Q5T0U0 273 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 TMTC4Q5T4D3 741 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 LYPLAL1Q5VWZ2 237 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 ARMC6Q6NXE6 501 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 PPP1R2P3Q6NXS1 205 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 KLHL35Q6PF15 583 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 FBXO38Q6PIJ6 1188 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 ABRAXAS1Q6UWZ7 409 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 BPHLQ86WA6 291 aaPredicted RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 RAVER1Q8IY67 606 aaKnown RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 SLC34A3Q8N130 599 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 TMEM102Q8N9M5 508 aaPredicted RBP9.05□□□□□ -0.96
PACS1-214ENST00000533811 SLC38A9Q8NBW4 561 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GPR26Q8NDV2 337 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 GDAP1Q8TB36 358 aa9.05□□□□□ -0.96
PACS1-214ENST00000533811 ADAMTS17Q8TE56 1095 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms