RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 CTSEP14091 401 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 STX2P32856 288 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 PHBP35232 272 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 GNPDA1P46926 289 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 ADARP55265 1226 aaKnown RBP21.51■■□□□ 1.03
VPS51-212ENST00000533656 B4GALNT1Q00973 533 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 MGAT5Q09328 741 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 ELOCQ15369 112 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 PYCR3Q53H96 274 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 HSP90AA5PQ58FG0 334 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 C3orf62Q6ZUJ4 267 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 GALNT7Q86SF2 657 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 CDKL2Q92772 493 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 VPS37BQ9H9H4 285 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 TMEM9BQ9NQ34 198 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 MRPL40Q9NQ50 206 aaKnown RBP21.51■■□□□ 1.03
VPS51-212ENST00000533656 PPANQ9NQ55 473 aaKnown RBP21.51■■□□□ 1.03
VPS51-212ENST00000533656 PNMA8BQ9ULN7 279 aaPredicted RBP21.51■■□□□ 1.03
VPS51-212ENST00000533656 CSNK1G3Q9Y6M4 447 aa21.51■■□□□ 1.03
VPS51-212ENST00000533656 GOLGA8KD6RF30 607 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 GOLGA8TH3BQL2 631 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 PRMT5O14744 637 aaPredicted RBP21.5■■□□□ 1.03
VPS51-212ENST00000533656 PCDHGA12O60330 932 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 SLC14A1Q13336 389 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 SEMA3AQ14563 771 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 SUZ12Q15022 739 aaKnown RBP21.5■■□□□ 1.03
VPS51-212ENST00000533656 ERCC6LQ2NKX8 1250 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 CCNI2Q6ZMN8 369 aaPredicted RBP21.5■■□□□ 1.03
VPS51-212ENST00000533656 MARK2Q7KZI7 788 aaKnown RBP21.5■■□□□ 1.03
VPS51-212ENST00000533656 RD3Q7Z3Z2 195 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 TRAPPC5Q8IUR0 188 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 RASGEF1AQ8N9B8 481 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 LINC00615Q96LM1 132 aaPredicted RBP21.5■■□□□ 1.03
VPS51-212ENST00000533656 TIMM29Q9BSF4 260 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 LRRC61Q9BV99 259 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 CLPBQ9H078 707 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 LRRC4CQ9HCJ2 640 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 TM7SF3Q9NS93 570 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 ZFATQ9P243 1243 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 ZNHIT2Q9UHR6 403 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 KLF15Q9UIH9 416 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 PCDHB1Q9Y5F3 818 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 AKAP13Q12802 2813 aa21.5■■□□□ 1.03
VPS51-212ENST00000533656 NEMP2A6NFY4 417 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 OR56A5P0C7T3 313 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 ERVK-10P10266 1014 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 VCLP18206 1134 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 RPS3P23396 243 aaKnown RBP eCLIP21.49■■□□□ 1.03
VPS51-212ENST00000533656 SSTR1P30872 391 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 PRLHRP49683 370 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 ILF3Q12906 894 aaKnown RBP eCLIP21.49■■□□□ 1.03
VPS51-212ENST00000533656 SHBQ15464 509 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 INAVAQ3KP66 663 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 ZNF542PQ5EBM4 170 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 PRRT3Q5FWE3 981 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 ZNF648Q5T619 568 aaPredicted RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 TMEM220Q6QAJ8 160 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 TRMT10CQ7L0Y3 403 aaKnown RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 C2CD4AQ8NCU7 369 aaPredicted RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 ZNF548Q8NEK5 533 aaPredicted RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 BOCQ9BWV1 1114 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 TSSK1BQ9BXA7 367 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 GSDMCQ9BYG8 508 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 CDC42EP4Q9H3Q1 356 aaKnown RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 IARS2Q9NSE4 1012 aaKnown RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 NINJ2Q9NZG7 142 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 IL1RAPL1Q9NZN1 696 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 FBXO5Q9UKT4 447 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 GPSM3Q9Y4H4 160 aa21.49■■□□□ 1.03
VPS51-212ENST00000533656 ASCC3Q8N3C0 2202 aaKnown RBP21.49■■□□□ 1.03
VPS51-212ENST00000533656 TCRBV9S1A1TA0A576 114 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 H3BMM5 538 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 AQP9O43315 295 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 FUCA1P04066 466 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 SLC1A2P43004 574 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 CLCNKAP51800 687 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 GPX6P59796 221 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 NAB1Q13506 487 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 PRAMEF14Q5SWL7 426 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 TEDDM1Q5T9Z0 273 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 TRMT10BQ6PF06 316 aaKnown RBP21.48■■□□□ 1.03
VPS51-212ENST00000533656 SLC26A11Q86WA9 606 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 GKN2Q86XP6 184 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 UNC5BQ8IZJ1 945 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 GPBAR1Q8TDU6 330 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 SAP25Q8TEE9 199 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 LPGAT1Q92604 370 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.48■■□□□ 1.03
VPS51-212ENST00000533656 GNPTGQ9UJJ9 305 aa21.48■■□□□ 1.03
VPS51-212ENST00000533656 V9GYY5 206 aaPredicted RBP21.48■■□□□ 1.03
VPS51-212ENST00000533656 CDX4O14627 284 aaPredicted RBP21.47■■□□□ 1.03
VPS51-212ENST00000533656 FTH1P02794 183 aa21.47■■□□□ 1.03
VPS51-212ENST00000533656 ESR1P03372 595 aa21.47■■□□□ 1.03
VPS51-212ENST00000533656 DGKAP23743 735 aa21.47■■□□□ 1.03
VPS51-212ENST00000533656 LEPRP48357 1165 aaKnown RBP21.47■■□□□ 1.03
VPS51-212ENST00000533656 CTSCP53634 463 aa21.47■■□□□ 1.03
VPS51-212ENST00000533656 VSNL1P62760 191 aa21.47■■□□□ 1.03
VPS51-212ENST00000533656 KYNUQ16719 465 aa21.47■■□□□ 1.03
VPS51-212ENST00000533656 N4BP2L1Q5TBK1 243 aaPredicted RBP21.47■■□□□ 1.03
VPS51-212ENST00000533656 KCTD16Q68DU8 428 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms