RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 SDC3O75056 442 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 TTC4O95801 387 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 GNPDA1P46926 289 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CCT5P48643 541 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 BLKP51451 505 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CTSCP53634 463 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 SLC14A1Q13336 389 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 ITIH4Q14624 930 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 MARK2Q7KZI7 788 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 TAS2R42Q7RTR8 314 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 C11orf96Q7Z7L8 435 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 LDB1Q86U70 411 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 NRROSQ86YC3 692 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 GATAD2AQ86YP4 633 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF548Q8NEK5 533 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 COPS8Q99627 209 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 SLC13A1Q9BZW2 595 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CARS2Q9HA77 564 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 SAYSD1Q9NPB0 183 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 TRNAU1APQ9NX07 287 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 IL1RAPL1Q9NZN1 696 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 PRKAB1Q9Y478 270 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CSNK1G3Q9Y6M4 447 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 PRR19A6NJB7 356 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 H3BM21 787 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 GRID2O43424 1007 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CDK14O94921 469 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 PAMP19021 973 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 C1orf61Q13536 156 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CUL1Q13616 776 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 TYSND1Q2T9J0 566 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 FASTKD1Q53R41 847 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 NEPROQ6NW34 567 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 PACS1Q6VY07 963 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CERS6Q6ZMG9 384 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 CCL4L1Q8NHW4 92 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 GPBAR1Q8TDU6 330 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 NAT14Q8WUY8 206 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 HEXDCQ8WVB3 486 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 IFT81Q8WYA0 676 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 OR2M4Q96R27 311 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 MOSPD1Q9UJG1 213 aa12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 TDRD6O60522 2096 aaKnown RBP12.55□□□□□ -0.4
RPUSD4-208ENST00000533628 GVINP1Q7Z2Y8 2422 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 TM4SF5O14894 197 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 AQP9O43315 295 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 SYF2O95926 243 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 MSH3P20585 1137 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 LYPLAL1Q5VWZ2 237 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 TRMT10BQ6PF06 316 aaKnown RBP12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 SGF29Q96ES7 293 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 CFAP36Q96G28 342 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 ETAA1Q9NY74 926 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 MOCS1Q9NZB8 636 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 SLC23A2Q9UGH3 650 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNHIT2Q9UHR6 403 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 GPR34Q9UPC5 381 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 PRSS21Q9Y6M0 314 aa12.54□□□□□ -0.4
RPUSD4-208ENST00000533628 OR1I1O60431 355 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 MAGEA4P43358 317 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 VSNL1P62760 191 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CTBSQ01459 385 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 TMEM220Q6QAJ8 160 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 GALNT13Q8IUC8 556 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 RELL1Q8IUW5 271 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 FSTL5Q8N475 847 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 ZCCHC2Q9C0B9 1178 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 C20orf96Q9NUD7 363 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 GULP1Q9UBP9 304 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 BTBD3Q9Y2F9 522 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 GPSM3Q9Y4H4 160 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 DNAH14Q0VDD8 3507 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 LMO7DNF2Z398 122 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 YY2O15391 372 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 C1QAP02745 245 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 ERVK-10P10266 1014 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 CTSEP14091 401 aa12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 ATP1B2P14415 290 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 OGNP20774 298 aaKnown RBP12.53□□□□□ -0.4
RPUSD4-208ENST00000533628 AKT1P31749 480 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms