RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 VPS35Q96QK1 796 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 GFM1Q96RP9 751 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 RANBP9Q96S59 729 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 LRRN3Q9H3W5 708 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 SUDS3Q9H7L9 328 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 TRIM39Q9HCM9 518 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 IL26Q9NPH9 171 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 WHRNQ9P202 907 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 RAXQ9Y2V3 346 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 GPSM3Q9Y4H4 160 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 PCDHGA8Q9Y5G5 932 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 ENTPD2Q9Y5L3 495 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 OAS3Q9Y6K5 1087 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 RP1P56715 2156 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 URB1O60287 2271 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
TRAPPC4-212ENST00000533058 ESYT3A0FGR9 886 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 CHUKO15111 745 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 PRAMEF1O95521 474 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ITGALP20701 1170 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCKBRP32239 447 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ACTR1BP42025 376 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 GPR3P46089 330 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 PDX1P52945 283 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 PLTPP55058 493 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ERVPABLB-1P60509 514 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ACTR1AP61163 376 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 PRAMEP78395 509 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCL7P80098 99 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 B4GALNT1Q00973 533 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 EIF3IQ13347 325 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 SQSTM1Q13501 440 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 HIF1AQ16665 826 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 TEX35Q5T0J7 233 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC30A9Q6PML9 568 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 SPRED1Q7Z699 444 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCNJLQ8IV13 435 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 MPP5Q8N3R9 675 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ARL14Q8N4G2 192 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 OTUD6BQ8N6M0 293 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR6P1Q8NGX9 317 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 LIN37Q96GY3 246 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 L2HGDHQ9H9P8 463 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 EPB41L5Q9HCM4 733 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 CHRAC1Q9NRG0 131 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC2A6Q9UGQ3 507 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 RNF215Q9Y6U7 377 aa12.77□□□□□ -0.37
TRAPPC4-212ENST00000533058 MROH6A6NGR9 719 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 D6RAR5 112 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 GRID2O43424 1007 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 VEGFDO43915 354 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 BRINP1O60477 761 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A9O60656 530 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 SRP72O76094 671 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 RPLP0P05388 317 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A6P19224 532 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A1P22309 533 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A4P22310 534 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 MC4RP32245 332 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A3P35503 534 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A5P35504 534 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 EIF2S3P41091 472 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 FASLGP48023 281 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 CAV1Q03135 178 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZFP36L1Q07352 338 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 HP1BP3Q5SSJ5 553 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 FNBP1LQ5T0N5 605 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 CES3Q6UWW8 571 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 MARK2Q7KZI7 788 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 PHYKPLQ8IUZ5 450 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 SFRP1Q8N474 314 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 WDR36Q8NI36 951 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF398Q8TD17 642 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 IFT81Q8WYA0 676 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 HDAC10Q969S8 669 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 PWWP2AQ96N64 755 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 FAM96AQ9H5X1 160 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ASB8Q9H765 288 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A7Q9HAW7 530 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A10Q9HAW8 530 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 UGT1A8Q9HAW9 530 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ARFGAP3Q9NP61 516 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ATXN10Q9UBB4 475 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNHIT2Q9UHR6 403 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 CRLS1Q9UJA2 301 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms