RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 MCM3P25205 808 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 PHBP35232 272 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ACTR1BP42025 376 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 MAGEA4P43358 317 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ARCN1P48444 511 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 RPIAP49247 311 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 CDKN1CP49918 316 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ACTR1AP61163 376 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 CTBSQ01459 385 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ILF2Q12905 390 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 BNIP3Q12983 259 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 C1orf61Q13536 156 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 FRG1Q14331 258 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 SLMAPQ14BN4 828 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 SHBQ15464 509 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 TYSND1Q2T9J0 566 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 BCL7AQ4VC05 210 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 KHDC1Q4VXA5 237 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ZNF648Q5T619 568 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 STEAP4Q687X5 459 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ZCCHC8Q6NZY4 707 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 TMEM220Q6QAJ8 160 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 UNC5AQ6ZN44 842 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 DET1Q7L5Y6 550 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 AMZ2Q86W34 360 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 AGGF1Q8N302 714 aaeCLIP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 RASGEF1AQ8N9B8 481 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 EIF1ADQ8N9N8 165 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 OR4C6Q8NH72 309 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 GPBAR1Q8TDU6 330 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 RHBDD1Q8TEB9 315 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 UBXN4Q92575 508 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 CDKL2Q92772 493 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 FCRL3Q96P31 734 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 CDC6Q99741 560 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 CCDC68Q9H2F9 335 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 TCEAL2Q9H3H9 227 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 OSGEPL1Q9H4B0 414 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 ZFATQ9P243 1243 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 FTSJ1Q9UET6 329 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 GNPTGQ9UJJ9 305 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 PCDHB1Q9Y5F3 818 aa11.67□□□□□ -0.54
PPFIA1-220ENST00000532024 CEP250Q9BV73 2442 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 H3BMM5 538 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 SLC30A4O14863 429 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PRSS56P0CW18 603 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 CD59P13987 128 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 IDSP22304 550 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 ARNTP27540 789 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 STX2P32856 288 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PRLHRP49683 370 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 MGAT5Q09328 741 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 BIRC2Q13490 618 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 FASTKD3Q14CZ7 662 aaKnown RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 TCEA2Q15560 299 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 TRADDQ15628 312 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 DEFB133Q30KQ1 61 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PLA2G4EQ3MJ16 856 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 HSP90AA5PQ58FG0 334 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PTRHD1Q6GMV3 140 aaKnown RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 SLC30A9Q6PML9 568 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 KIAA0408Q6ZU52 694 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 KANSL1Q7Z3B3 1105 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 CILP2Q8IUL8 1156 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 SLC25A45Q8N413 288 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 EID2Q8N6I1 236 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 FAM46DQ8NEK8 389 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 SGF29Q96ES7 293 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PANX3Q96QZ0 392 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 DPEP2Q9H4A9 486 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 STN1Q9H668 368 aaKnown RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 KLC4Q9NSK0 619 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 UCKL1Q9NWZ5 548 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 MARCH4Q9P2E8 410 aaPredicted RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 TXNDC16Q9P2K2 825 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 NFU1Q9UMS0 254 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 PRKAB1Q9Y478 270 aa11.66□□□□□ -0.54
PPFIA1-220ENST00000532024 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 LAMA1P25391 3075 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 PLXNB3Q9ULL4 1909 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 MGAT4DA6NG13 374 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 KPNA5O15131 536 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 YY2O15391 372 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 POP7O75817 140 aaKnown RBP11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 ESR1P03372 595 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 FUCA1P04066 466 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 PBLDP30039 288 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 HALP42357 657 aa11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 CARSP49589 748 aaKnown RBP11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 DUSP3P51452 185 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-220ENST00000532024 CLCNKAP51800 687 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms