RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 STEAP1Q9UHE8 339 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 CPSF3Q9UKF6 684 aaKnown RBP5.62□□□□□ -1.51
CD44-231ENST00000531110 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 VPS4AQ9UN37 437 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 ST3GAL5Q9UNP4 418 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 HPSEQ9Y251 543 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 CARMIL3Q8ND23 1372 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 IQSEC2Q5JU85 1478 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 ADGRB3O60242 1522 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 CEP170BQ9Y4F5 1589 aaPredicted RBP5.62□□□□□ -1.51
CD44-231ENST00000531110 FER1L4A9Z1Z3 1794 aa5.62□□□□□ -1.51
CD44-231ENST00000531110 A0A1W2PP64 1363 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 ILVBLA1L0T0 632 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 OR2W5A6NFC9 320 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 ARGFXA6NJG6 315 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PER2O15055 1255 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CLOCKO15516 846 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TMPRSS11DO60235 418 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 MED14O60244 1454 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TSPAN3O60637 253 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CSDE1O75534 798 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 ADGRL1O94910 1474 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CEP152O94986 1710 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TGDSO95455 350 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PTBP3O95758 552 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 GUCA1CO95843 209 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PLGP00747 810 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 OCM2P0CE71 109 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 OCMP0CE72 109 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 KRT5P13647 590 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CCNE1P24864 410 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 HLA-FP30511 346 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 RRM2P31350 389 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TALDO1P37837 337 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 HTR3AP46098 478 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 SLC9A3P48764 834 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PPM1FP49593 454 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 EIF2B2P49770 351 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 SULT1E1P49888 294 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 NEK3P51956 506 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PSMD4P55036 377 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 CSNK2BP67870 215 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CCNA1P78396 465 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 OTUD4Q01804 1114 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 GUCY2DQ02846 1103 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 FOXO1Q12778 655 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CSTF3Q12996 717 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 PDCLQ13371 301 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 ACVR2BQ13705 512 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 MXD4Q14582 209 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 KCNJ8Q15842 424 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 KRT24Q2M2I5 525 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 AARDQ4LEZ3 155 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PCID2Q5JVF3 399 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 HECTD3Q5T447 861 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 KLHDC7AQ5VTJ3 777 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 DCLRE1AQ6PJP8 1040 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PTCHD4Q6ZW05 846 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PEX26Q7Z412 305 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 SLC9B2Q86UD5 537 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 GATAD2AQ86YP4 633 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 WDR49Q8IV35 697 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 LIX1LQ8IVB5 337 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 UNC45BQ8IWX7 931 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 RCOR2Q8IZ40 523 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 ELMOD2Q8IZ81 293 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 LPCAT1Q8NF37 534 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 PHOSPHO2Q8TCD6 241 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 GIPC3Q8TF64 312 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CCDC12Q8WUD4 166 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 MRPS27Q92552 414 aaKnown RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 PTPRUQ92729 1446 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 RAB7BQ96AH8 199 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 KLHL29Q96CT2 875 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 REPS1Q96D71 796 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 CHMP6Q96FZ7 201 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 ZNF764Q96H86 408 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 USP47Q96K76 1375 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 SGCZQ96LD1 299 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 HIST1H2AAQ96QV6 131 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 ZNF184Q99676 751 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 NAPGQ99747 312 aaPredicted RBP5.61□□□□□ -1.51
CD44-231ENST00000531110 PRXQ9BXM0 1461 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 STK33Q9BYT3 514 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 OR2B2Q9GZK3 357 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 SLC25A32Q9H2D1 315 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 LRMDAQ9H2I8 198 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TMEM245Q9H330 911 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 NTN4Q9HB63 628 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 TRPV4Q9HBA0 871 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 NECTIN3Q9NQS3 549 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 SMYD2Q9NRG4 433 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 IL17RBQ9NRM6 502 aa5.61□□□□□ -1.51
CD44-231ENST00000531110 SNX15Q9NRS6 342 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms