RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 NUP107P57740 925 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 OR4D2P58180 307 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 EMX2Q04743 252 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 PMS2P3Q13401 168 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 GPR162Q16538 588 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 AASDHQ4L235 1098 aaPredicted RBP19.05■□□□□ 0.64
VPS28-213ENST00000530983 SLC2A7Q6PXP3 512 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 Q6ZSR9 355 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 USP51Q70EK9 711 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 LYSMD3Q7Z3D4 306 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 CDYL2Q8N8U2 506 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 FNDC5Q8NAU1 212 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 OR52B6Q8NGF0 335 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 CD200R1Q8TD46 325 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 SEPHS2Q99611 448 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 CINPQ9BW66 212 aaPredicted RBP19.05■□□□□ 0.64
VPS28-213ENST00000530983 MAGEH1Q9H213 219 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 SUN2Q9UH99 717 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 SH3GLB1Q9Y371 365 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 V9GYQ6 96 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 TLR5O60602 858 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 VPS26AO75436 327 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 PKMP14618 531 aaKnown RBP19.05■□□□□ 0.64
VPS28-213ENST00000530983 CR2P20023 1033 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 CBX3Q13185 183 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 KCNA10Q16322 511 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 C5orf22Q49AR2 442 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 TBPL2Q6SJ96 375 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 Q6ZNX1 250 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 ZFAND4Q86XD8 727 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 SMYD1Q8NB12 490 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 LINGO1Q96FE5 620 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 CDK15Q96Q40 435 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 TDRD1Q9BXT4 1180 aaKnown RBP19.05■□□□□ 0.64
VPS28-213ENST00000530983 CXorf21Q9HAI6 301 aa19.05■□□□□ 0.64
VPS28-213ENST00000530983 C2orf81A6NN90 581 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 INSIG1O15503 277 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 SYNCRIPO60506 623 aaKnown RBP19.04■□□□□ 0.64
VPS28-213ENST00000530983 ENTPD1P49961 510 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 FAM26DQ5JW98 314 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 GPSM1Q86YR5 675 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 ZBTB8BQ8NAP8 495 aaPredicted RBP19.04■□□□□ 0.64
VPS28-213ENST00000530983 VPS50Q96JG6 964 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 SEPT5Q99719 369 aaPredicted RBP19.04■□□□□ 0.64
VPS28-213ENST00000530983 SPON2Q9BUD6 331 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 CHID1Q9BWS9 393 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 LRRC3Q9BY71 257 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 HIPK3Q9H422 1215 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 RIC8BQ9NVN3 520 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 TBCCD1Q9NVR7 557 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 UBA2Q9UBT2 640 aaPredicted RBP19.04■□□□□ 0.64
VPS28-213ENST00000530983 FKBPLQ9UIM3 349 aa19.04■□□□□ 0.64
VPS28-213ENST00000530983 TRMT6Q9UJA5 497 aaKnown RBP19.04■□□□□ 0.64
VPS28-213ENST00000530983 SH3PXD2BA1X283 911 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 TMX2-CTNND1H3BSU7 103 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 GIPC1O14908 333 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ERVPABLB-1P60509 514 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ADARB1P78563 741 aaKnown RBP19.03■□□□□ 0.64
VPS28-213ENST00000530983 PROSER1Q86XN7 944 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 HID1Q8IV36 788 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 BPIFB1Q8TDL5 484 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 LINC01599Q8WXQ3 324 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ZNF382Q96SR6 550 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 DCUN1D5Q9BTE7 237 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 CD274Q9NZQ7 290 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 CDH7Q9ULB5 785 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ZFP37Q9Y6Q3 630 aaPredicted RBP19.03■□□□□ 0.64
VPS28-213ENST00000530983 H3BNC9 293 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 BOLA2-SMG1P6H3BVE0 249 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 SYN3O14994 580 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 VNN2O95498 520 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 EOMESO95936 686 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 NPPAP01160 153 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 MC4RP32245 332 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 IL2P60568 153 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 NKX3-2P78367 333 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 TRIM32Q13049 653 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 PRKG2Q13237 762 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 MRPL58Q14197 206 aaKnown RBP19.03■□□□□ 0.64
VPS28-213ENST00000530983 RAB39AQ14964 217 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ATP6AP1LQ52LC2 224 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 CST9Q5W186 159 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 LETMD1Q6P1Q0 360 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 DLEU7Q6UYE1 221 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 RASAL3Q86YV0 1011 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 CROCCP3Q8IVE0 287 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 CPNE9Q8IYJ1 553 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 LPCAT1Q8NF37 534 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 OSCP1Q8WVF1 389 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 RNF145Q96MT1 663 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 OSBPL6Q9BZF3 934 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ZNHIT2Q9UHR6 403 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 ST14Q9Y5Y6 855 aa19.03■□□□□ 0.64
VPS28-213ENST00000530983 TTC36A6NLP5 189 aa19.02■□□□□ 0.64
VPS28-213ENST00000530983 ATE1O95260 518 aa19.02■□□□□ 0.64
VPS28-213ENST00000530983 ZDHHC11BP0C7U3 371 aa19.02■□□□□ 0.64
VPS28-213ENST00000530983 LPOP22079 712 aaPredicted RBP19.02■□□□□ 0.64
VPS28-213ENST00000530983 TTPAP49638 278 aa19.02■□□□□ 0.64
VPS28-213ENST00000530983 ZNF157P51786 506 aaPredicted RBP19.02■□□□□ 0.64
VPS28-213ENST00000530983 PTPRRQ15256 657 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms