RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SEPT14Q6ZU15 432 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 KCTD20Q7Z5Y7 419 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SNX32Q86XE0 403 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 DIS3L2Q8IYB7 885 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 LNX2Q8N448 690 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 FAM109AQ8N4B1 249 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 FBXO39Q8N4B4 442 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 FAM46DQ8NEK8 389 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 POC1BQ8TC44 478 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CREB3L4Q8TEY5 395 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 WDR60Q8WVS4 1066 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CPT1BQ92523 772 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SCAMP4Q969E2 229 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SH3KBP1Q96B97 665 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 NSUN4Q96CB9 384 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 APOPT1Q96IL0 206 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 COQ10AQ96MF6 247 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 TBX15Q96SF7 602 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SPATA5L1Q9BVQ7 753 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 HERC2P3Q9BVR0 1158 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 POLDIP3Q9BY77 421 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PUS3Q9BZE2 481 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PNNQ9H307 717 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 EBF3Q9H4W6 596 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 UNKLQ9H9P5 680 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SLC38A10Q9HBR0 1119 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 HPS4Q9NQG7 708 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 GKN1Q9NS71 199 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SEPT11Q9NVA2 429 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 STK39Q9UEW8 545 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 RPS6KA6Q9UK32 745 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 HSF4Q9ULV5 492 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 C19orf53Q9UNZ5 99 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 NAALADL1Q9UQQ1 740 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 DNAJC16Q9Y2G8 782 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 FRMD4BQ9Y2L6 1034 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 MAP3K2Q9Y2U5 619 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PSAT1Q9Y617 370 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 HS3ST3A1Q9Y663 406 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 COL27A1Q8IZC6 1860 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 A0A087X1B8 175 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 PNMA6EA0A0J9YXQ4 647 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 VWA3AA6NCI4 1184 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A18PA6NE21 464 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A16PA6NEW6 464 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A9PA6NNJ1 464 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A5PA8MXJ8 464 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 E7ENX8 843 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 J3KTA2 159 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 GTPBP1O00178 669 aaKnown RBP3.15□□□□□ -1.91
CSDE1-209ENST00000525132 SYN3O14994 580 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ZSCAN9O15535 394 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-209ENST00000525132 CCP110O43303 1012 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ARHGEF9O43307 516 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 DFNA5O60443 496 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF217O75362 1048 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 CDKL5O76039 1030 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 KIF20AO95235 890 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 RASAL1O95294 804 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 NDUFA10O95299 355 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 KLF8O95600 359 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FSHBP01225 129 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 VIPP01282 170 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 HLA-DOAP06340 250 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A15PP0C7V4 464 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A14PP0C7W9 464 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 PIM1P11309 404 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ACADMP11310 421 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 MST1P26927 711 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 SHMT1P34896 483 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ARL3P36405 182 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 MLH1P40692 756 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 GDF5P43026 501 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 WNT3P56703 355 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 RPP30P78346 268 aaKnown RBP3.15□□□□□ -1.91
CSDE1-209ENST00000525132 HSD11B2P80365 405 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 MC2RQ01718 297 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 TAP2Q03519 686 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FOXI1Q12951 378 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 RESTQ13127 1097 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 MPP3Q13368 585 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ATP1A4Q13733 1029 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FZD2Q14332 565 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 NFIL3Q16649 462 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 HNRNPA1L2Q32P51 320 aaKnown RBP3.15□□□□□ -1.91
CSDE1-209ENST00000525132 HSDL1Q3SXM5 330 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 CTXN3Q4LDR2 81 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 HECTD3Q5T447 861 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 FAM69AQ5T7M9 428 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 TTC22Q5TAA0 569 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 MANEALQ5VSG8 457 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 ABHD17BQ5VST6 288 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 PLEKHA7Q6IQ23 1121 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 SLC30A6Q6NXT4 461 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 TAF2Q6P1X5 1199 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 KLHL24Q6TFL4 600 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 KRT74Q7RTS7 529 aa3.15□□□□□ -1.91
CSDE1-209ENST00000525132 GAS2L3Q86XJ1 694 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms