RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TMC3Q7Z5M5 1100 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 AGAP3Q96P47 875 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 SLC25A23Q9BV35 468 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 RAD18Q9NS91 495 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 HEY1Q9Y5J3 304 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 ZNF106Q9H2Y7 1883 aaKnown RBP25.44■■□□□ 1.66
PVT1-219ENST00000523427 A0A087X0T9 212 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 ARGFXA6NJG6 315 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 FAM228BP0C875 321 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 EBLN1P0CF75 366 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 BPIP17213 487 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 ARL4DP49703 201 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 PGDP52209 483 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 DCDC1P59894 354 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 AP1B1Q10567 949 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 CLEC17AQ6ZS10 378 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 APLFQ8IW19 511 aaPredicted RBP25.43■■□□□ 1.66
PVT1-219ENST00000523427 CPLX3Q8WVH0 158 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 TRIB3Q96RU7 358 aa25.43■■□□□ 1.66
PVT1-219ENST00000523427 NBPF19A0A087WUL8 3843 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 A0A1B0GTH6 734 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 GOLGA6L3A6NEY3 463 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 SMTNL1A8MU46 457 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 C21orf140B9A014 251 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 VEGFDO43915 354 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 SERPINC1P01008 464 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 VCLP18206 1134 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 HALP42357 657 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 GTF2H3Q13889 308 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 B4GALNT4Q76KP1 1039 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 GALNT11Q8NCW6 608 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 MAGEE1Q9HCI5 957 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 ACSS2Q9NR19 701 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 LUZP4Q9P127 313 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 CTTNBP2NLQ9P2B4 639 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 PSMD13Q9UNM6 376 aa25.42■■□□□ 1.66
PVT1-219ENST00000523427 MYO9AB2RTY4 2548 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 SPENQ96T58 3664 aaKnown RBP25.41■■□□□ 1.66
PVT1-219ENST00000523427 UNC79Q9P2D8 2635 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 A1L4Q6 167 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 AURKAO14965 403 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 RPS15P62841 145 aaKnown RBP25.41■■□□□ 1.66
PVT1-219ENST00000523427 PLCL1Q15111 1095 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 AGAP9Q5VTM2 703 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 PDPK2PQ6A1A2 396 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 ALKBH5Q6P6C2 394 aaKnown RBP25.41■■□□□ 1.66
PVT1-219ENST00000523427 CYB5D1Q6P9G0 228 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 NT5DC3Q86UY8 548 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 RBM12BQ8IXT5 1001 aaKnown RBP25.41■■□□□ 1.66
PVT1-219ENST00000523427 GPR150Q8NGU9 434 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 RAPGEF5Q92565 580 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 TTC25Q96NG3 672 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 MAP3K3Q99759 626 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 MAP10Q9P2G4 905 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 EPHA6Q9UF33 1036 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 TMPRSS11EQ9UL52 423 aa25.41■■□□□ 1.66
PVT1-219ENST00000523427 BZW2Q9Y6E2 419 aaKnown RBP25.41■■□□□ 1.66
PVT1-219ENST00000523427 SEMA7AO75326 666 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 PROSCO94903 275 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 RECKO95980 971 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 PTPN4P29074 926 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 IFI35P80217 286 aaPredicted RBP25.4■■□□□ 1.66
PVT1-219ENST00000523427 CDK18Q07002 472 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 PPIDQ08752 370 aaKnown RBP25.4■■□□□ 1.66
PVT1-219ENST00000523427 TMEM115Q12893 351 aaPredicted RBP25.4■■□□□ 1.66
PVT1-219ENST00000523427 ATP13A5Q4VNC0 1218 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 CCDC70Q6NSX1 233 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 WASH2PQ6VEQ5 465 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 SPATA22Q8NHS9 363 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 SSC4DQ8WTU2 575 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 UBXN4Q92575 508 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 MR1Q95460 341 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 FAF2Q96CS3 445 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 GBP4Q96PP9 640 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 WASH6PQ9NQA3 447 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 FGF21Q9NSA1 209 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 SPO11Q9Y5K1 396 aa25.4■■□□□ 1.66
PVT1-219ENST00000523427 SERPING1P05155 500 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 PDE1BQ01064 536 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 IL10RAQ13651 578 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 UGT8Q16880 541 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 C11orf96Q7Z7L8 435 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 THAP4Q8WY91 577 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 IMP4Q96G21 291 aaKnown RBP25.39■■□□□ 1.66
PVT1-219ENST00000523427 SLC41A2Q96JW4 573 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 RNF157Q96PX1 679 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 GPR87Q9BY21 358 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 ING2Q9H160 280 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 UBP1Q9NZI7 540 aa25.39■■□□□ 1.66
PVT1-219ENST00000523427 FARSAQ9Y285 508 aaKnown RBP25.39■■□□□ 1.66
PVT1-219ENST00000523427 DDX3YO15523 660 aaKnown RBP25.38■■□□□ 1.65
PVT1-219ENST00000523427 PMPCBO75439 489 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 MT-CYBP00156 380 aaPredicted RBP25.38■■□□□ 1.65
PVT1-219ENST00000523427 RNF224P0DH78 156 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 FECHP22830 423 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 KDELR1P24390 212 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 ACY1Q03154 408 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 NR1I3Q14994 352 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 DNTTIP2Q5QJE6 756 aaKnown RBP25.38■■□□□ 1.65
PVT1-219ENST00000523427 NPNTQ6UXI9 565 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms