RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZG16BQ96DA0 208 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 ERO1AQ96HE7 468 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 TXNDC15Q96J42 360 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 SEMA3CQ99985 751 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 FBXL2Q9UKC9 423 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 LOXL2Q9Y4K0 774 aa5.22□□□□□ -1.57
HMGB1P46-201ENST00000520062 A0A087WV48 116 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 J3QR06 171 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 PSMD14O00487 310 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 SOCS6O14544 535 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 TSPAN1O60635 241 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 DIAPH2O60879 1101 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLU7O95391 586 aaKnown RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 HOXB2P14652 356 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 HOXD3P31249 432 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 HOXC13P31276 330 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 ZNF75DP51815 510 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 SNRPEP62304 92 aaKnown RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 SCN1BQ07699 218 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 HSPB3Q12988 150 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 PPIGQ13427 754 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 SMN1Q16637 294 aaKnown RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 KCNT1Q5JUK3 1230 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 CAVIN1Q6NZI2 390 aaKnown RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 MFSD6Q6ZSS7 791 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 ATG9AQ7Z3C6 839 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 GPR180Q86V85 440 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 TMEM173Q86WV6 379 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 MFN1Q8IWA4 741 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 ZNF595Q8IYB9 648 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 GDAP1Q8TB36 358 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 UTP15Q8TED0 518 aaKnown RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 DENND1AQ8TEH3 1009 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 RND1Q92730 232 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 POT1Q9NUX5 634 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 PRMT7Q9NVM4 692 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 PADI3Q9ULW8 664 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 FRMD4BQ9Y2L6 1034 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 NME7Q9Y5B8 376 aa5.21□□□□□ -1.58
HMGB1P46-201ENST00000520062 TRAV34A0A0B4J273 112 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 A0A0U1RQJ8 604 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR6C75A6NL08 312 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 ANXA2P2A6NMY6 339 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 TMEM189-UBE2V1I3L0A0 370 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLC16A5O15375 505 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 ZBTB43O43298 467 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 AKAP8O43823 692 aaKnown RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SSX4O60224 188 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 RFPL2O75678 378 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 TOMM70O94826 608 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 CELF2O95319 508 aaKnown RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 TGDSO95455 350 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 DANCRP0C864 163 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SRCP12931 536 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 DNASE1P24855 282 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 ITGB8P26012 769 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 OAS2P29728 719 aaKnown RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 C21orf33P30042 268 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 TLX1P31314 330 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 HSPA4P34932 840 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 CLDN20P56880 219 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 PPATQ06203 517 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 UBE2V1Q13404 147 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 VWC2Q2TAL6 325 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLC10A5Q5PT55 438 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 KRT39Q6A163 491 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 C8orf82Q6P1X6 216 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 FAM122CQ6P4D5 195 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SYCE2Q6PIF2 218 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 PIM3Q86V86 326 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLC5A8Q8N695 610 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 AFAP1L1Q8TED9 768 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 RPL36ALQ969Q0 106 aaKnown RBP5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 NXNL1Q96CM4 212 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 ERLEC1Q96DZ1 483 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 QRFPRQ96P65 431 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 FERMT1Q9BQL6 677 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 MGME1Q9BQP7 344 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLC25A33Q9BSK2 321 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 MRIQ9BWK5 157 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 FAM129AQ9BZQ8 928 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 WNT5BQ9H1J7 359 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 STK26Q9P289 416 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 PTGFRNQ9P2B2 879 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLC24A2Q9UI40 661 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 KLHL20Q9Y2M5 609 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 POMT1Q9Y6A1 747 aa5.2□□□□□ -1.58
HMGB1P46-201ENST00000520062 ARHGEF17Q96PE2 2063 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 A0A0B4J293 547 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 A0A1W2PP11 408 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 ARHGEF37A1IGU5 675 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 SOCS2O14508 198 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 STX6O43752 255 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 MED24O75448 989 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 PENKP01210 267 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 EEF1B2P24534 225 aaKnown RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 TCF7P36402 384 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 MTHFRP42898 656 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 KCNJ4P48050 445 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 BMXP51813 675 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms