RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TOP1MTQ969P6 601 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 PPP1R16AQ96I34 528 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 TEKT5Q96M29 485 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 TRMOQ9BU70 441 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 PIGVQ9NUD9 493 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 RPS6KB2Q9UBS0 482 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 KLHL20Q9Y2M5 609 aa10.74□□□□□ -0.69
PCDHGA1-202ENST00000517417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 VILLO15195 856 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 MATN3O15232 486 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 RPP40O75818 363 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 NCK1P16333 377 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 PPM1AP35813 382 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TUBA4AP68366 448 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 MRPL28Q13084 256 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CASP12Q6UXS9 341 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CLEC20AQ6ZU45 233 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ADHFE1Q8IWW8 467 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ARL14EPQ8N8R7 260 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZNF557Q8N988 423 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 STYXQ8WUJ0 223 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ATL1Q8WXF7 558 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ARNTL2Q8WYA1 636 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 MYO19Q96H55 970 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 SCLYQ96I15 445 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 OR52E6Q96RD3 313 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC25A51Q9H1U9 297 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 BRD9Q9H8M2 597 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 HMG20AQ9NP66 347 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TCAF1Q9Y4C2 921 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 U3KQV3 271 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 LTBP1Q14766 1721 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 H3BNH8 94 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 EI24O14681 340 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ERAL1O75616 437 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ELFN1P0C7U0 828 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 PABPC1P11940 636 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TUBB3Q13509 450 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 C1DQ13901 141 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 RFTN1Q14699 578 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 HSF5Q4G112 596 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 KLHL35Q6PF15 583 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 KIAA1324Q6UXG2 1013 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZNF438Q7Z4V0 828 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ROPN1LQ96C74 230 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 APOL4Q9BPW4 351 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC39A8Q9C0K1 460 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 FANCEQ9HB96 536 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 RIMS3Q9UJD0 308 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 NCKAP1Q9Y2A7 1128 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZFP37Q9Y6Q3 630 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 SDHDO14521 159 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 DYRK3O43781 588 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ACSL4O60488 711 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 WASP42768 502 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 YAP1P46937 504 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 BNIP3Q12983 259 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CRHR2Q13324 411 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CES5AQ6NT32 575 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CYP20A1Q6UW02 462 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ISOC1Q96CN7 298 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZMAT2Q96NC0 199 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ATG10Q9H0Y0 220 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 KIAA1522Q9P206 1035 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 GTF2IRD1Q9UHL9 959 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 OAZ3Q9UMX2 235 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 LRRC37AA6NMS7 1700 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC22A3O75751 556 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CDK14O94921 469 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CLTBP09497 229 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TFPTP0C1Z6 253 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 PITX1P78337 314 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 PPP1R3AQ16821 1122 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CES4AQ5XG92 561 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZCCHC8Q6NZY4 707 aaKnown RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 HFE2Q6ZVN8 426 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 CHSY3Q70JA7 882 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TP53INP2Q8IXH6 220 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TBC1D21Q8IYX1 336 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 OR8H2Q8N162 312 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 SMYD1Q8NB12 490 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 FNDC8Q8TC99 324 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 TWIST2Q8WVJ9 160 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 C6orf62Q9GZU0 229 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 EPS8L2Q9H6S3 715 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 VRTNQ9H8Y1 702 aa10.73□□□□□ -0.69
PCDHGA1-202ENST00000517417 PRR23D1E9PI22 279 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CCL16O15467 120 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 FOXD2O60548 495 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CLIC3O95833 236 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 PRR23D2P0DMB1 279 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SOX6P35712 828 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CAPGP40121 348 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 RPS24P62847 133 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 PAFAH1B3Q15102 231 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TRIP4Q15650 581 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 XKR5Q6UX68 686 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 UBE2R2Q712K3 238 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms