RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ELOVL5Q9NYP7 299 aa3.24□□□□□ -1.89
RNU6-390P-201ENST00000516259 C1RLQ9NZP8 487 aa3.24□□□□□ -1.89
RNU6-390P-201ENST00000516259 GTF3C4Q9UKN8 822 aa3.24□□□□□ -1.89
RNU6-390P-201ENST00000516259 PTPRCP08575 1304 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 FLT1P17948 1338 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 FAM90A10PA6NDY2 464 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 C15orf62A8K5M9 175 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SOCS6O14544 535 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SSX4O60224 188 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SYNCRIPO60506 623 aaKnown RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 TRUB2O95900 331 aaKnown RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 LDLRP01130 860 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 VDRP11473 427 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 PSMA3P25788 255 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 ITGB8P26012 769 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 PCGF2P35227 344 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 ZNF75DP51815 510 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 CLDN20P56880 219 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 EEF1A1P68104 462 aaKnown RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 KRT33BQ14525 404 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 CCDC142Q17RM4 750 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 TWISTNBQ3B726 338 aaPredicted RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 KRBOX4Q5JUW0 171 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 EEF1A1P5Q5VTE0 462 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 PLA2G4FQ68DD2 849 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 TYW3Q6IPR3 259 aaKnown RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 ZNF425Q6IV72 752 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 CCNI2Q6ZMN8 369 aaPredicted RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 GLRX5Q86SX6 157 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 GPR180Q86V85 440 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 PRAG1Q86YV5 1406 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 GALNT13Q8IUC8 556 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 AFAP1Q8N556 730 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SLC5A8Q8N695 610 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 NRACQ8N912 160 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 RBM15BQ8NDT2 890 aaKnown RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 KIF18AQ8NI77 898 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 TXNDC15Q96J42 360 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 FER1L6-AS2Q96M78 137 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 ZNF385AQ96PM9 386 aaKnown RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 DDOQ99489 341 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SEMA3CQ99985 751 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 HGH1Q9BTY7 390 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 ABHD6Q9BV23 337 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SPRTNQ9H040 489 aaPredicted RBP3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SMARCAL1Q9NZC9 954 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 STK26Q9P289 416 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 PCDHA7Q9UN72 937 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 GRIP1Q9Y3R0 1128 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 PCDHGA5Q9Y5G8 931 aa3.23□□□□□ -1.89
RNU6-390P-201ENST00000516259 SOS1Q07889 1333 aaPredicted RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 IGLV5-52A0A0A0MRZ9 124 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 DNAJC9-AS1A6NH13 148 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ANXA2P2A6NMY6 339 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PRR32B1ATL7 298 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 H0Y626 953 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 H3BQ06 376 aaPredicted RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 J3QR06 171 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PTGESO14684 152 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 TO15178 435 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 KCNJ13O60928 360 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 CASTP20810 708 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 S1PR1P21453 382 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 EEF1B2P24534 225 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 LMO1P25800 156 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 CTNNA1P35221 906 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 TCF7P36402 384 aaPredicted RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 USP8P40818 1118 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 MTHFRP42898 656 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PEX5P50542 639 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 NAGLUP54802 743 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 SEC61A1P61619 476 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 SNRPEP62304 92 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 IRX6P78412 446 aaPredicted RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PPATQ06203 517 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 DDR1Q08345 913 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ZNF155Q12901 538 aaPredicted RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 RALGDSQ12967 914 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 HSPB3Q12988 150 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PPIGQ13427 754 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ZNF273Q14593 569 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ETFDHQ16134 617 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 CALCRLQ16602 461 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ODF3L2Q3SX64 289 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 KCNT1Q5JUK3 1230 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 C6orf136Q5SQH8 315 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 C1QTNF12Q5T7M4 302 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 DCLRE1AQ6PJP8 1040 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 RNF113BQ8IZP6 322 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ZNF114Q8NC26 417 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PPFIBP2Q8ND30 876 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 OR2AK2Q8NG84 335 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 OR5R1Q8NH85 324 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 C9orf43Q8TAL5 461 aaPredicted RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 TBC1D16Q8TBP0 767 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 UTP15Q8TED0 518 aaKnown RBP3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 PIGTQ969N2 578 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 SLAMF9Q96A28 289 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 ERLEC1Q96DZ1 483 aa3.22□□□□□ -1.89
RNU6-390P-201ENST00000516259 VMP1Q96GC9 406 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms