RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 VPS37BQ9H9H4 285 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 CARS2Q9HA77 564 aaKnown RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 CYP4F12Q9HCS2 524 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 FGF22Q9HCT0 170 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 IL26Q9NPH9 171 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 MRPL40Q9NQ50 206 aaKnown RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 NLGN3Q9NZ94 848 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 MOCS1Q9NZB8 636 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 NFKBIL1Q9UBC1 381 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 CTNNAL1Q9UBT7 734 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 FTSJ1Q9UET6 329 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 APOBEC3BQ9UH17 382 aaKnown RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 DOLKQ9UPQ8 538 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 APOBEC2Q9Y235 224 aaKnown RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 SLC17A4Q9Y2C5 497 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 TMEM98Q9Y2Y6 226 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 PKP3Q9Y446 797 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 ADAMTS9Q9P2N4 1935 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 TMEM120BA0PK00 339 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 PRSS38A1L453 326 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 FAM159BA6NKW6 160 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 FADS2P1A8MWK0 482 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 AP3B1O00203 1094 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 TRIM38O00635 465 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 INPP4BO15327 924 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 FFAR2O15552 330 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 BUD23O43709 281 aaKnown RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 TYROBPO43914 113 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 AVILO75366 819 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 BANF1O75531 89 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 SLC25A14O95258 325 aaPredicted RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 SLC4A1P02730 911 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 FUCA1P04066 466 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 CDK4P11802 303 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 CKMT2P17540 419 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 SPAM1P38567 509 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 POLD2P49005 469 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 DUSP3P51452 185 aaPredicted RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 FOXK2Q01167 660 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 CDH17Q12864 832 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 NAB1Q13506 487 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 LAMB3Q13751 1172 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 MPP2Q14168 576 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 RGS9BPQ6ZS82 235 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 SLCO6A1Q86UG4 719 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 ANKMY2Q8IV38 441 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 PALM2Q8IXS6 379 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 DNAAF3Q8N9W5 541 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 OR4K2Q8NGD2 314 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 MDM1Q8TC05 714 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 ZNF398Q8TD17 642 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 BCAS4Q8TDM0 211 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 GLMNQ92990 594 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 GLYATL1Q969I3 302 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 ALKBH8Q96BT7 664 aaKnown RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 SGSM3Q96HU1 749 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 CCT8L2Q96SF2 557 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 PAFAH2Q99487 392 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 LRRC61Q9BV99 259 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 RMI1Q9H9A7 625 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 TRIM39Q9HCM9 518 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 INTS9Q9NV88 658 aaKnown RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 TRNAU1APQ9NX07 287 aaKnown RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
CCL28-204ENST00000514421 APPL1Q9UKG1 709 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 SUFUQ9UMX1 484 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 CHMP2BQ9UQN3 213 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 GPSM3Q9Y4H4 160 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 KCTD3Q9Y597 815 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 PCDHGA1Q9Y5H4 931 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 ARL5AQ9Y689 179 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 ANKRD36A6QL64 1941 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 CACNA1AO00555 2505 aa8.23□□□□□ -1.09
CCL28-204ENST00000514421 TDRD6O60522 2096 aaKnown RBP8.22□□□□□ -1.09
CCL28-204ENST00000514421 PLXNA2O75051 1894 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 GLYATL1P3A0A0U1RQE8 302 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 SDR42E2A6NKP2 422 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 SMIM23A6NLE4 172 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 GPR89AB7ZAQ6 455 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 LDB2O43679 373 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 NUAK1O60285 661 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A9O60656 530 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 FTH1P19P0C7X4 201 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 GPR89BP0CG08 455 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 BRAFP15056 766 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 CREB1P16220 341 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A6P19224 532 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 DRD4P21917 467 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A1P22309 533 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A4P22310 534 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 ADRA1DP25100 572 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A3P35503 534 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 UGT1A5P35504 534 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 HADHAP40939 763 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 NPY2RP49146 381 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 RPIAP49247 311 aa8.22□□□□□ -1.09
CCL28-204ENST00000514421 SLC18A2Q05940 514 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms