RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FAM120BQ96EK7 910 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 PGAM5Q96HS1 289 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 FEM1CQ96JP0 617 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ZNF778Q96MU6 729 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 WDFY2Q96P53 400 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 SH3GL2Q99962 352 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 FAM110AQ9BQ89 295 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 SEZ6LQ9BYH1 1024 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 DEFB129Q9H1M3 183 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 GHITMQ9H3K2 345 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 MRPL44Q9H9J2 332 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 HINT3Q9NQE9 182 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 TMOD2Q9NZR1 351 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 CNOT8Q9UFF9 292 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 SLCO3A1Q9UIG8 710 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 NFE2L3Q9Y4A8 694 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ARFGEF1Q9Y6D6 1849 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 TNRC6CQ9HCJ0 1690 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 CNTNAP1P78357 1384 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 MED23Q9ULK4 1368 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 BCORQ6W2J9 1755 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 CACNA1SQ13698 1873 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 A0A1B0GVT2 93 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 hCG_1807616A0A1W2PRN6 198 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 hDV102S1A0JD36 115 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 LRRC72A6NJI9 287 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 CD8B2A6NJW9 211 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 BECN2A8MW95 431 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 HS3ST1O14792 307 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 TGFB1I1O43294 461 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 KLK8O60259 260 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 KCNJ13O60928 360 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 HOXC6P09630 235 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 HOXB2P14652 356 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 GNLYP22749 145 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 BDNFP23560 247 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 PSMB10P40306 273 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 AMTP48728 403 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 METAP2P50579 478 aaKnown RBP eCLIP4.24□□□□□ -1.73
HTT-210ENST00000512909 ADORA2A-AS1P86434 159 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 FOXM1Q08050 763 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 IKQ13123 557 aaPredicted RBP4.24□□□□□ -1.73
HTT-210ENST00000512909 GPS2Q13227 327 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 CTTNQ14247 550 aaKnown RBP4.24□□□□□ -1.73
HTT-210ENST00000512909 CTF1Q16619 201 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 MEA1Q16626 185 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 CCDC158Q5M9N0 1113 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 ZNF549Q6P9A3 640 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 TAOK1Q7L7X3 1001 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 IRF2BP2Q7Z5L9 587 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 PIP4P1Q86T03 277 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 APOBEC3FQ8IUX4 373 aaKnown RBP4.24□□□□□ -1.73
HTT-210ENST00000512909 SLC35F3Q8IY50 421 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 CERS5Q8N5B7 392 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.24□□□□□ -1.73
HTT-210ENST00000512909 OR14L1PQ8NHC6 308 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 GPT2Q8TD30 523 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 OIT3Q8WWZ8 545 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 TEKT1Q969V4 418 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 SLC41A2Q96JW4 573 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 MSTO1Q9BUK6 570 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 C1QTNF1Q9BXJ1 281 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 CNGB3Q9NQW8 809 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 ZBTB40Q9NUA8 1239 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 OGFRQ9NZT2 677 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 RAI14Q9P0K7 980 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 TBC1D29Q9UFV1 150 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 ADAM18Q9Y3Q7 739 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 SNX9Q9Y5X1 595 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 COL4A5P29400 1685 aa4.24□□□□□ -1.73
HTT-210ENST00000512909 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 FAM90A10PA6NDY2 464 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 TAF4O00268 1085 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 VCYO14598 125 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 RGS14O43566 566 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 HCRTR2O43614 444 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 JRKO75564 520 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CIAO1O76071 339 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 OAZ2O95190 189 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CSH1P0DML2 217 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CSH2P0DML3 217 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 G6PDP11413 515 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 ADORA1P30542 326 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 RFX5P48382 616 aaPredicted RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 PCYT1AP49585 367 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CXCR3P49682 368 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 CAMPP49913 170 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 MMP14P50281 582 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 NLRP5P59047 1200 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 MAD2L1Q13257 205 aaPredicted RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 PRPF4BQ13523 1007 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 KRT33BQ14525 404 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 MVPQ14764 893 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 TOMM20Q15388 145 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 ALG11Q2TAA5 492 aa4.23□□□□□ -1.73
HTT-210ENST00000512909 RABL6Q3YEC7 729 aaPredicted RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 TDRD12Q587J7 1177 aaKnown RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 PPP6R3Q5H9R7 873 aaPredicted RBP4.23□□□□□ -1.73
HTT-210ENST00000512909 ZNF425Q6IV72 752 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms