RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PDE7BQ9NP56 450 aa12.36□□□□□ -0.43
VEGFA-216ENST00000512683 SLC23A2Q9UGH3 650 aa12.36□□□□□ -0.43
VEGFA-216ENST00000512683 KLHL3Q9UH77 587 aa12.36□□□□□ -0.43
VEGFA-216ENST00000512683 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
VEGFA-216ENST00000512683 LRRD1A4D1F6 860 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CYSRT1A8MQ03 144 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 PDZK1P1A8MUH7 402 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 AKR1B15C9JRZ8 316 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-216ENST00000512683 MTSS1O43312 755 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 SPAG6O75602 509 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 NDUFA10O95299 355 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 TYRP1P17643 537 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 HMGCLP35914 325 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 DLSTP36957 453 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 HALP42357 657 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CAPZBP47756 277 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 NR2C2P49116 596 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 ACY1Q03154 408 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 DMPKQ09013 629 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 TMEM115Q12893 351 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-216ENST00000512683 GTF2H3Q13889 308 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 ZFYVE27Q5T4F4 411 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CACHD1Q5VU97 1274 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 C16orf46Q6P387 395 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 SARM1Q6SZW1 724 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 RASGRP3Q8IV61 690 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-216ENST00000512683 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 OR8K5Q8NH50 307 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CXorf40BQ96DE9 158 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 STAMBPL1Q96FJ0 436 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF514Q96K75 400 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-216ENST00000512683 TTC25Q96NG3 672 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 TGM7Q96PF1 710 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 OR6C1Q96RD1 312 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CD180Q99467 661 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 ZCCHC2Q9C0B9 1178 aaKnown RBP12.35□□□□□ -0.43
VEGFA-216ENST00000512683 SCHIP1Q9P0W5 487 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-216ENST00000512683 CROTQ9UKG9 612 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 INTUQ9ULD6 942 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 HYOU1Q9Y4L1 999 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 HEY1Q9Y5J3 304 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 BSNQ9UPA5 3926 aa12.35□□□□□ -0.43
VEGFA-216ENST00000512683 APOL1O14791 398 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 CREG1O75629 220 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 RASSF9O75901 435 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 PYGMP11217 842 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 BRAFP15056 766 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 BPIP17213 487 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 F8A1P23610 371 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 SLC1A1P43005 524 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 TNNT3P45378 269 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-216ENST00000512683 PMS2P54278 862 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 GFERP55789 205 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 AP1B1Q10567 949 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 TAZQ16635 292 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF547Q8IVP9 402 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 MIB2Q96AX9 1013 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 OLFM3Q96PB7 478 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 GLOD4Q9HC38 313 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 HACD3Q9P035 362 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 SHOC2Q9UQ13 582 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF711Q9Y462 761 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 FLNCQ14315 2725 aa12.34□□□□□ -0.43
VEGFA-216ENST00000512683 SDK2Q58EX2 2172 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 NBASA2RRP1 2371 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 LOC285095A0A1B0GVY8 99 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 PIPSLA2A3N6 862 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 KATNA1O75449 491 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 RFPL1O75677 317 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 KIAA0754O94854 1291 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 LCA5LO95447 670 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 COMTP21964 271 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 FECHP22830 423 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.44
VEGFA-216ENST00000512683 HADHBP55084 474 aaKnown RBP12.33□□□□□ -0.44
VEGFA-216ENST00000512683 PDE1BQ01064 536 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 GALNT3Q14435 633 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 IGFBP7Q16270 282 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 LDLRAP1Q5SW96 308 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 MFSD7Q6UXD7 560 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 C11orf96Q7Z7L8 435 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 AMZ2Q86W34 360 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 HPS6Q86YV9 775 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 GALNT6Q8NCL4 622 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-216ENST00000512683 TEKT5Q96M29 485 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 AGAP3Q96P47 875 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 VAT1Q99536 393 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 CEP41Q9BYV8 373 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 LHX9Q9NQ69 397 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 DDX56Q9NY93 547 aaKnown RBP12.33□□□□□ -0.44
VEGFA-216ENST00000512683 FAM153AQ9UHL3 310 aa12.33□□□□□ -0.44
VEGFA-216ENST00000512683 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms