RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	GRID2	O43424	1007 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PIAS2	O75928	621 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	RASGRP1	O95267	797 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	SHBG	P04278	402 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	MYF5	P13349	255 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	ATP1B2	P14415	290 aa	Predicted RBP	14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PAM	P19021	973 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	MSH3	P20585	1137 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	OGN	P20774	298 aa	Known RBP	14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	GCA	P28676	217 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PBLD	P30039	288 aa	Predicted RBP	14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	FMO4	P31512	558 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	GMPR	P36959	345 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	RXRG	P48443	463 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PMS2	P54278	862 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PPARD	Q03181	441 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	THOC5	Q13769	683 aa	Known RBP	14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	ITIH4	Q14624	930 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	CSRP2	Q16527	193 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	KBTBD12	Q3ZCT8	623 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PACS1	Q6VY07	963 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	PRR23C	Q6ZRP0	262 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	DCP2	Q8IU60	420 aa	Known RBP	14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	MINDY1	Q8N5J2	469 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	OTUD6B	Q8N6M0	293 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	FAM174A	Q8TBP5	190 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	FUT8	Q9BYC5	575 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	ERVMER34-1	Q9H9K5	563 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	VPS18	Q9P253	973 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	ZNHIT2	Q9UHR6	403 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	KCNK6	Q9Y257	313 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	BTBD3	Q9Y2F9	522 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	GPSM3	Q9Y4H4	160 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	DGKB	Q9Y6T7	804 aa		14.34	□□□□□ -0.11
MATR3-238	ENST00000512107	VEGFD	O43915	354 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	NIPSNAP2	O75323	286 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	POP7	O75817	140 aa	Known RBP	14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	ACP5	P13686	325 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	DGKA	P23743	735 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	CTBS	Q01459	385 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	PTK2B	Q14289	1009 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	BCL7A	Q4VC05	210 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	CHST15	Q7LFX5	561 aa	Predicted RBP	14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	ZNF548	Q8NEK5	533 aa	Predicted RBP	14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	SAP25	Q8TEE9	199 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	RUBCN	Q92622	972 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	FAM136A	Q96C01	138 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	OR2M4	Q96R27	311 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	NDN	Q99608	321 aa		14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	NUSAP1	Q9BXS6	441 aa	Known RBP	14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	PPAN	Q9NQ55	473 aa	Known RBP	14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	APOBEC3B	Q9UH17	382 aa	Known RBP	14.33	□□□□□ -0.12
MATR3-238	ENST00000512107	ARID1B	Q8NFD5	2236 aa	Predicted RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	HMX2	A2RU54	273 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	TNF	P01375	233 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	GSTA2	P09210	222 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	HTR1B	P28222	390 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	EPHA8	P29322	1005 aa	Predicted RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	DPP6	P42658	865 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	LEPR	P48357	1165 aa	Known RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	PRLHR	P49683	370 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	CDKN2D	P55273	166 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	EIF3B	P55884	814 aa	Known RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	NFE2L1	Q14494	772 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	PRRT3	Q5FWE3	981 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	MRNIP	Q6NTE8	343 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	CERS6	Q6ZMG9	384 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	CYS1	Q717R9	158 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	MYRIP	Q8NFW9	859 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	GIMAP7	Q8NHV1	300 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	GPBAR1	Q8TDU6	330 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	LMX1A	Q8TE12	382 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	ZBTB9	Q96C00	473 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	MRRF	Q96E11	262 aa	Known RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	ATXN7L3B	Q96GX2	97 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	FAM167B	Q9BTA0	163 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	SPATS2L	Q9NUQ6	558 aa	Known RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	SCHIP1	Q9P0W5	487 aa	Predicted RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	DNAJC16	Q9Y2G8	782 aa		14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	14.32	□□□□□ -0.12
MATR3-238	ENST00000512107	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	PRAMEF33	A0A0G2JMD5	474 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	UBA6	A0AVT1	1052 aa	Predicted RBP	14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	TRIM38	O00635	465 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	PRMT5	O14744	637 aa	Predicted RBP	14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	CASC3	O15234	703 aa	Known RBP	14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	NDUFS3	O75489	264 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	CD59	P13987	128 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	ZNF7	P17097	686 aa	Predicted RBP	14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	KEL	P23276	732 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	RPS3	P23396	243 aa	Known RBP eCLIP	14.31	□□□□□ -0.12	1e-11	■□□□□ 8.4
MATR3-238	ENST00000512107	CCR7	P32248	378 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	HSD17B3	P37058	310 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	TTPA	P49638	278 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	TUBB4B	P68371	445 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	SLC29A2	Q14542	456 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	SLMAP	Q14BN4	828 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	LYPLAL1	Q5VWZ2	237 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	RABEPK	Q7Z6M1	372 aa		14.31	□□□□□ -0.12
MATR3-238	ENST00000512107	STRA8	Q7Z7C7	330 aa		14.31	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms