RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ANAPC2Q9UJX6 822 aa4.99□□□□□ -1.61
TRAPPC11-208ENST00000511955 STAP1Q9ULZ2 295 aa4.99□□□□□ -1.61
TRAPPC11-208ENST00000511955 DAPP1Q9UN19 280 aa4.99□□□□□ -1.61
TRAPPC11-208ENST00000511955 PACSIN2Q9UNF0 486 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC11-208ENST00000511955 MTO1Q9Y2Z2 717 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-208ENST00000511955 COPG1Q9Y678 874 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-208ENST00000511955 GOLGA8QA0A0J9YX86 632 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MACROD2A1Z1Q3 448 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SPATA31C2B4DYI2 1134 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRRG1O14668 218 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZSCAN12O43309 604 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 DNPH1O43598 174 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 IDH3BO43837 385 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 NDUFS6O75380 124 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 RASSF9O75901 435 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 WFS1O76024 890 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GH1P01241 217 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ANXA2P07355 339 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 HMBSP08397 361 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CNPP09543 421 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SELPP16109 830 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 NAGAP17050 411 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SYN1P17600 705 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ITGB6P18564 788 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 TNFRSF1AP19438 455 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 NFKB1P19838 968 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 AGAP20933 346 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ITPKAP23677 461 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CD1BP29016 333 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CTSOP43234 321 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC7A2P52569 658 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 COPB1P53618 953 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 EPHB3P54753 998 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CDH8P55286 799 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SELENOVP59797 346 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 STX1BP61266 288 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ARHGAP1Q07960 439 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 IFFO1Q0D2I5 559 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 RASGEF1BQ0VAM2 473 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SCAPQ12770 1279 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SCGB2A2Q13296 93 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GAMTQ14353 236 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PARP6Q2NL67 630 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 BTBD16Q32M84 506 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PABPC1LQ4VXU2 614 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 WIPI1Q5MNZ9 446 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ADGRF1Q5T601 910 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 NAA35Q5VZE5 725 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MBNL2Q5VZF2 373 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC51BQ86UW2 128 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ADGRF2Q8IZF7 708 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 KIRREL3Q8IZU9 778 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM185AQ8N0U4 392 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GPR161Q8N6U8 529 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PLD5Q8N7P1 536 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF680Q8NEM1 530 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PCDH19Q8TAB3 1148 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ASAP3Q8TDY4 903 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GAD1Q99259 594 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC29A1Q99808 456 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SH2D3AQ9BRG2 576 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CNPY3Q9BT09 278 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 OSBPL8Q9BZF1 889 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 IMPG2Q9BZV3 1241 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF576Q9H609 170 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 TRPC7Q9HCX4 862 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 NECTIN3Q9NQS3 549 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MBNL1Q9NR56 388 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF275Q9NSD4 429 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 TDP1Q9NUW8 608 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ATXN10Q9UBB4 475 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ASIC3Q9UHC3 531 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 TMCO1Q9UM00 188 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 HBS1LQ9Y450 684 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 UBIAD1Q9Y5Z9 338 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PDE4DIPQ5VU43 2346 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 IGLV3-22A0A075B6J6 115 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 A0A0A6YYC8 382 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 A0A1W2PQ45 241 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 A0A1W2PQY0 241 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 LIPT2A6NK58 231 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 C12orf71A8MTZ7 269 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SUPT3HB4E1H0 165 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 I3L1I5 382 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MEIS1O00470 390 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 KCNK3O14649 394 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MSH4O15457 936 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 EDIL3O43854 480 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SSX5O60225 188 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF862O60290 1169 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GAS8O95995 478 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ADH1BP00325 375 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 YES1P07947 543 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 TMEM253P0C7T8 217 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ERCC2P18074 760 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 LCN1P31025 176 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ATP5C1P36542 298 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CASP4P49662 377 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms