RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NTN3O00634 580 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 GRID2O43424 1007 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 TLX3O43711 291 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 MTX2O75431 263 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 SEC31AO94979 1220 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 JMJD7P0C870 316 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PNLIPP16233 465 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 ITPKBP27987 946 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 NMBRP28336 390 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 ECHS1P30084 290 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 SESN2P58004 480 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 OR1D5P58170 312 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 DCDC1P59894 354 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 B4GALNT1Q00973 533 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 DR1Q01658 176 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 ACVR1Q04771 509 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 FASTKD3Q14CZ7 662 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 TAF1AQ15573 450 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 CHRNA6Q15825 494 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PHF19Q5T6S3 580 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 BROXQ5VW32 411 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 DUPD1Q68J44 220 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 HIBCHQ6NVY1 386 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 LRRC8BQ6P9F7 803 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 FAM151BQ6UXP7 276 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 USP53Q70EK8 1073 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 RAB11FIP2Q7L804 512 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 SPRED1Q7Z699 444 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PIM3Q86V86 326 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PHYKPLQ8IUZ5 450 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PIANPQ8IYJ0 282 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 UNC5BQ8IZJ1 945 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 TRAM1L1Q8N609 369 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF248Q8NDW4 579 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 BRSK1Q8TDC3 778 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 KCNE4Q8WWG9 221 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PATE1Q8WXA2 126 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 AHCYL2Q96HN2 611 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 SIGLEC10Q96LC7 697 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 TTC25Q96NG3 672 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 FCRL3Q96P31 734 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 LRRC1Q9BTT6 524 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 TRIM31Q9BZY9 425 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 OSGEPL1Q9H4B0 414 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 FAM96AQ9H5X1 160 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 STN1Q9H668 368 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 RMI1Q9H9A7 625 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 CHRAC1Q9NRG0 131 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 TREX1Q9NSU2 369 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 IL1RAPL1Q9NZN1 696 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 RNF14Q9UBS8 474 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 DMGDHQ9UI17 866 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 KCNK6Q9Y257 313 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 SNX24Q9Y343 169 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 PKP3Q9Y446 797 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 LAMA5O15230 3695 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 DSPP15924 2871 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 GOLGA6L10A0A0M3HER8 536 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 A0A1W2PQM1 296 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ESYT3A0FGR9 886 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 AGAP14A8MT82 685 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ESPNB1AK53 854 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 PLD2O14939 933 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 B4GAT1O43505 415 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 DNAJC6O75061 913 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 CPNE6O95741 557 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC2A4P14672 509 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 FOXN2P32314 431 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 PAFAH1B1P43034 410 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ITGA8P53708 1063 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ERVPABLB-1P60509 514 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 EIF3IQ13347 325 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 GTF2H3Q13889 308 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 WHAMMP3Q1A5X7 153 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 INSCQ1MX18 579 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 PLA2G4EQ3MJ16 856 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 IZUMO3Q5VZ72 239 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ZDHHC20Q5W0Z9 365 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 PDPK2PQ6A1A2 396 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 CRTC3Q6UUV7 619 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 B3GNT8Q7Z7M8 397 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 PDZD3Q86UT5 571 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF547Q8IVP9 402 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 NAGSQ8N159 534 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 MCUQ8NE86 351 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 GLYATL1Q969I3 302 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 MFSD3Q96ES6 412 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC46A1Q96NT5 459 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 RANBP9Q96S59 729 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC38A3Q99624 504 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 CARD6Q9BX69 1037 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 DPH5Q9H2P9 285 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 TRABDQ9H4I3 376 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 L2HGDHQ9H9P8 463 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 RDH14Q9HBH5 336 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 TRIM39Q9HCM9 518 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms