RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 DAG1Q14118 895 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 ZNF829Q3KNS6 432 aaPredicted RBP12.91□□□□□ -0.34
CAST-223ENST00000508608 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 AARS2Q5JTZ9 985 aaKnown RBP12.91□□□□□ -0.34
CAST-223ENST00000508608 TMEM26Q6ZUK4 368 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 FKBP9P1Q75LS8 142 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 RIMKLAQ8IXN7 391 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 SFRP1Q8N474 314 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 CHCHD4Q8N4Q1 142 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 ITFG2Q969R8 447 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 ING2Q9H160 280 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 EIF2B4Q9UI10 523 aaKnown RBP12.91□□□□□ -0.34
CAST-223ENST00000508608 ZNF225Q9UK10 706 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 SPO11Q9Y5K1 396 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
CAST-223ENST00000508608 E2F3O00716 465 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 OR4F21O95013 312 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 ANXA6P08133 673 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 JUNBP17275 347 aaPredicted RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 ARSFP54793 590 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 TMBIM6P55061 237 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 OR4D2P58180 307 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 EPS8Q12929 822 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 TUBA3CQ13748 450 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 NEDD8Q15843 81 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 BROXQ5VW32 411 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 UGT3A1Q6NUS8 523 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 SLC2A7Q6PXP3 512 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 C2orf69Q8N8R5 385 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 CDYL2Q8N8U2 506 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 ITFG1Q8TB96 612 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 KCNJ9Q92806 393 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 LINGO1Q96FE5 620 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 MAGED4Q96JG8 741 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 ACOX2Q99424 681 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 SLAMF8Q9P0V8 285 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 GALPQ9UBC7 116 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 PCNTO95613 3336 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 GLTPD2A6NH11 291 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 ENPP3O14638 875 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 PRSS23O95084 383 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 TSPAN12O95859 305 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 CES1P23141 567 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 HOXD9P28356 352 aaPredicted RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 IL12AP29459 219 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 CLCN4P51793 760 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 GNA12Q03113 381 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 CHRNB3Q05901 458 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 SCIMPQ6UWF3 145 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 SIDT2Q8NBJ9 832 aaKnown RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 PDPRQ8NCN5 879 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
CAST-223ENST00000508608 PCDHGA11Q9Y5H2 935 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 TNPO3Q9Y5L0 923 aaKnown RBP12.9□□□□□ -0.34
CAST-223ENST00000508608 V9GYQ6 96 aa12.9□□□□□ -0.34
CAST-223ENST00000508608 A0A1W2PPW3 197 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 GOLGA8CPA6NN73 597 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 E5RI56 91 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 SYN3O14994 580 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 INSIG1O15503 277 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 MT-ND1P03886 318 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 THRBP10828 461 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 MBL2P11226 248 aaPredicted RBP12.89□□□□□ -0.35
CAST-223ENST00000508608 CCNA2P20248 432 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 MAP4P27816 1152 aaKnown RBP12.89□□□□□ -0.35
CAST-223ENST00000508608 SOX11P35716 441 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 SCNN1BP51168 640 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 DSC1Q08554 894 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 TAF10Q12962 218 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 PWP1Q13610 501 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 OTUD3Q5T2D3 398 aaPredicted RBP12.89□□□□□ -0.35
CAST-223ENST00000508608 NADSYN1Q6IA69 706 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 FAM117BQ6P1L5 589 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 ELMSAN1Q6PJG2 1045 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 FAM126BQ8IXS8 530 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 CLEC4FQ8N1N0 589 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 TBC1D15Q8TC07 691 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 CD200R1Q8TD46 325 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 CCDC115Q96NT0 180 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 TDRD1Q9BXT4 1180 aaKnown RBP12.89□□□□□ -0.35
CAST-223ENST00000508608 UGT2B28Q9BY64 529 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 PALMDQ9NP74 551 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 VWA8A3KMH1 1905 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 C16orf96A6NNT2 1141 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 NIPSNAP2O75323 286 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 S100BP04271 92 aaPredicted RBP12.89□□□□□ -0.35
CAST-223ENST00000508608 ALPLP05186 524 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 IMPDH2P12268 514 aa12.89□□□□□ -0.35
CAST-223ENST00000508608 ZNF12P17014 697 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms