RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 POPDC3Q9HBV1 291 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 MID1IP1Q9NPA3 183 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 TSC2P49815 1807 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 AGAP5A6NIR3 686 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PAPSS2O95340 614 aaPredicted RBP15.74■□□□□ 0.11
SCLT1-208ENST00000506368 JCHAINP01591 159 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 POLR2JP52435 117 aaKnown RBP15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PLK1P53350 603 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PGGT1BP53609 377 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 CRHR2Q13324 411 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 GRB7Q14451 532 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 TAF1CQ15572 869 aaPredicted RBP15.74■□□□□ 0.11
SCLT1-208ENST00000506368 AGAP6Q5VW22 663 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 C7orf31Q8N865 590 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 OR8J3Q8NGG0 315 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 FCGR1BQ92637 280 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 TP53INP1Q96A56 240 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 LGALS12Q96DT0 336 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 AGAP4Q96P64 663 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 IL12RB2Q99665 862 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 MAGIXQ9H6Y5 334 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 RALGAPA2Q2PPJ7 1873 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PLXNA1Q9UIW2 1896 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 ARNTLO00327 626 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 HBP1O60381 514 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 CCNKO75909 580 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 ANGPTL1O95841 491 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 MT-CO1P00395 513 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 CYP11A1P05108 521 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 TCF3P15923 654 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 IL1RNP18510 177 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 CHRM3P20309 590 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 COPZ1P61923 177 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 CDK5R2Q13319 367 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 KEAP1Q14145 624 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 POU6F1Q14863 301 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 TMEM132BQ14DG7 1078 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 MAPK11Q15759 364 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 AMHR2Q16671 573 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 PLA2G4EQ3MJ16 856 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 PPP2R2DQ66LE6 453 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 HIPK1Q86Z02 1210 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 RNF135Q8IUD6 432 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 TP53INP2Q8IXH6 220 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 MCOLN3Q8TDD5 553 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 EMILIN2Q9BXX0 1053 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 TXNRD2Q9NNW7 524 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 ABCB10Q9NRK6 738 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 SMPD4Q9NXE4 827 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 QPCTLQ9NXS2 382 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 GRIP1Q9Y3R0 1128 aa15.73■□□□□ 0.11
SCLT1-208ENST00000506368 PNMA8CA0A1B0GUJ8 204 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 GUCY1B2O75343 617 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 KCNK2O95069 426 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 C1RP00736 705 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 F9P00740 461 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 EDNRBP24530 442 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 CXCR2P25025 360 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 ADORA2BP29275 332 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 ADRA1AP35348 466 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 GNG2P59768 71 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 SLC35A2P78381 396 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 LCP2Q13094 533 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TRAF3Q13114 568 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 CLCA4Q14CN2 919 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 RBM20Q5T481 1227 aaKnown RBP15.72■□□□□ 0.11
SCLT1-208ENST00000506368 DENND5AQ6IQ26 1287 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 LAIR2Q6ISS4 152 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 ERAP2Q6P179 960 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 SNX29P2Q8IUI4 249 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 NPWQ8N729 165 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 NETO2Q8NC67 525 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 IPCEF1Q8WWN9 437 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-208ENST00000506368 ZHX1-C8orf76Q96EF9 292 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TNIP3Q96KP6 325 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 MINDY3Q9H8M7 445 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 RNF186Q9NXI6 227 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 CPA4Q9UI42 421 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 FBXW11Q9UKB1 542 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 MKLN1Q9UL63 735 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 SPO11Q9Y5K1 396 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 HTTP42858 3142 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 A0A087WZ62 844 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 ASPDHA6ND91 283 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 HAT1O14929 419 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 LRIG2O94898 1065 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 CST1P01037 141 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TRAPPC2P0DI81 140 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TRAPPC2BP0DI82 140 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 NR4A2P43354 598 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 VBP1P61758 197 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 CSNK2BP67870 215 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 PRKG2Q13237 762 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 FUT11Q495W5 492 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 PAGE3Q5JUK9 113 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCLT1-208ENST00000506368 STEAP3Q658P3 488 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 EFCAB12Q6NXP0 572 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 TMC5Q6UXY8 1006 aa15.72■□□□□ 0.11
SCLT1-208ENST00000506368 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms