RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CLCA2Q9UQC9 943 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 KIR2DS5A0A0G2JLQ3 304 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 A0A0G2JNG1 304 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 FAM149AA5PLN7 773 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 KLHL33A6NCF5 533 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 OR51F1A6NGY5 319 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 KIR2DS3K7RE56 304 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 NTN3O00634 580 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 SNX2O60749 519 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 TCEA3O75764 348 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 GOT2P00505 430 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 ATP1B2P14415 290 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 ITIH4Q14624 930 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 KIR2DS5Q14953 304 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 DBN1Q16643 649 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 FNBP1LQ5T0N5 605 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 RNASEH2BQ5TBB1 312 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 AGAP9Q5VTM2 703 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 DET1Q7L5Y6 550 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 TAS2R42Q7RTR8 314 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 CCNJLQ8IV13 435 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 PPIL6Q8IXY8 311 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 OR4L1Q8NH43 312 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 SLC37A2Q8TED4 501 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 GATA6Q92908 595 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 SERPINB12Q96P63 405 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 TMEM121BQ9BXQ6 578 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 PRDM8Q9NQV8 689 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 SOX13Q9UN79 622 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 DNAJC16Q9Y2G8 782 aa17.93■□□□□ 0.46
PDLIM7-209ENST00000503346 GOLGA4Q13439 2230 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 RHPN2P1A8MT19 583 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 DNALI1O14645 258 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 AVILO75366 819 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 IDSP22304 550 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 MAGEA3P43357 314 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 GPR3P46089 330 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 PRLHRP49683 370 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 PRAMEP78395 509 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 DR1Q01658 176 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 TARDBPQ13148 414 aaKnown RBP eCLIP17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 CAMK2BQ13554 666 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 LYPLAL1Q5VWZ2 237 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 ABRAXAS1Q6UWZ7 409 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 SPRED1Q7Z699 444 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 MARCH9Q86YJ5 346 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 OR6P1Q8NGX9 317 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 DEPDC7Q96QD5 511 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 LRRN3Q9H3W5 708 aa17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 SARS2Q9NP81 518 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-209ENST00000503346 TRBV23OR9-2A0A075B6M9 112 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 A0A1W2PQM1 296 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 MGAT4DA6NG13 374 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 CASC3O15234 703 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 PPM1DO15297 605 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 RPLP0P05388 317 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 IVDP26440 423 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 NMBRP28336 390 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 CCL7P80098 99 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 BIRC2Q13490 618 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 DHX34Q14147 1143 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 PACS1Q6VY07 963 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 CERS6Q6ZMG9 384 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 RBM44Q6ZP01 1051 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 PCGF5Q86SE9 256 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 SLC9B2Q86UD5 537 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 HOOK3Q86VS8 718 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 JAMLQ86YT9 394 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 BEND7Q8N7W2 519 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 Q8N9G6 341 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 AVL9Q8NBF6 648 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 SPATA4Q8NEY3 305 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 OR2L2Q8NH16 312 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 NAT14Q8WUY8 206 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 C16orf45Q96MC5 204 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 STN1Q9H668 368 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 SCHIP1Q9P0W5 487 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 MYLKQ15746 1914 aa17.91■□□□□ 0.46
PDLIM7-209ENST00000503346 MAGEB16A2A368 324 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 SDR42E2A6NKP2 422 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 PDZK1P1A8MUH7 402 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 GOLGA8MH3BSY2 632 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 ZW10O43264 779 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 B4GAT1O43505 415 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 AP2A2O94973 939 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 BRAFP15056 766 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 NSG1P42857 185 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 UBE2IP63279 158 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 HHEXQ03014 270 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 SPIDRQ14159 915 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 NFE2L1Q14494 772 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 FASTKD1Q53R41 847 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 METRNLQ641Q3 311 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 FAM83HQ6ZRV2 1179 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 MPP5Q8N3R9 675 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 MFSD3Q96ES6 412 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms