RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 RAB44Q7Z6P3 723 aaPredicted RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 AMZ2Q86W34 360 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 OR6C4Q8NGE1 309 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 CCDC74AQ96AQ1 378 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 TTC1Q99614 292 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 CCDC3Q9BQI4 270 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 TRIM56Q9BRZ2 755 aaKnown RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 PRDM8Q9NQV8 689 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 CATSPERZQ9NTU4 200 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 SNX24Q9Y343 169 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 MAD1L1Q9Y6D9 718 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 MAGEB16A2A368 324 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SMAPO00193 183 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SGTAO43765 313 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
PRKCB-210ENST00000498739 VAPBO95292 243 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 F3P13726 295 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SLC2A4P14672 509 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 GLB1P16278 677 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 PAMP19021 973 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 IDSP22304 550 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 PMLP29590 882 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 PRLHRP49683 370 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 CLDN6P56747 220 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 E2F1Q01094 437 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SEMA3AQ14563 771 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 ITIH4Q14624 930 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SEPT7Q16181 437 aaKnown RBP16.49■□□□□ 0.23
PRKCB-210ENST00000498739 BCL7AQ4VC05 210 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 AARS2Q5JTZ9 985 aaKnown RBP16.49■□□□□ 0.23
PRKCB-210ENST00000498739 HIBCHQ6NVY1 386 aaPredicted RBP16.49■□□□□ 0.23
PRKCB-210ENST00000498739 C17orf82Q86X59 251 aaPredicted RBP16.49■□□□□ 0.23
PRKCB-210ENST00000498739 AGGF1Q8N302 714 aaeCLIP16.49■□□□□ 0.236e-8■■■■■ 30.3
PRKCB-210ENST00000498739 ARL14Q8N4G2 192 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 MAPK15Q8TD08 544 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 ZNF669Q96BR6 464 aaPredicted RBP16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SIGLEC10Q96LC7 697 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 ABCG4Q9H172 646 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 DPH5Q9H2P9 285 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SYNDIG1Q9H7V2 258 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 LRIT1Q9P2V4 623 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 FAM8A1Q9UBU6 413 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 MRFAP1Q9Y605 127 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 RPS6KL1Q9Y6S9 549 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 RNF215Q9Y6U7 377 aa16.49■□□□□ 0.23
PRKCB-210ENST00000498739 SPTBN4Q9H254 2564 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 FAM237BA0A1B0GVD1 139 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 A6NCN8 305 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 PDZK1P1A8MUH7 402 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 CD3EAPO15446 510 aaKnown RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 KCNJ13O60928 360 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 BANF1O75531 89 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 SPINK2P20155 84 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 PPARGP37231 505 aaPredicted RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 NSG1P42857 185 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 RPL21P46778 160 aaKnown RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 DHX9Q08211 1270 aaKnown RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 NFE2L1Q14494 772 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 DNAJC21Q5F1R6 531 aaKnown RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 KIAA0930Q6ICG6 404 aaPredicted RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 CERS6Q6ZMG9 384 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 LDB1Q86U70 411 aaPredicted RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 CLDN19Q8N6F1 224 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 SLC37A2Q8TED4 501 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 STAMBPL1Q96FJ0 436 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 ERP44Q9BS26 406 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 MARCH4Q9P2E8 410 aaPredicted RBP16.48■□□□□ 0.23
PRKCB-210ENST00000498739 RABGEF1Q9UJ41 708 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 BPTFQ12830 3046 aa16.48■□□□□ 0.23
PRKCB-210ENST00000498739 MGAT4DA6NG13 374 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 PRR19A6NJB7 356 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 RHPN2P1A8MT19 583 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 GOLGA8KD6RF30 607 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 GOLGA8TH3BQL2 631 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 NDC80O14777 642 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 NUDT21O43809 227 aaKnown RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 OPA1O60313 960 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 ARNTP27540 789 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 RPL10P27635 214 aaKnown RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 INSM1Q01101 510 aaPredicted RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 DMPKQ09013 629 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 TUBB2AQ13885 445 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 BBS9Q3SYG4 887 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 ANKRD20A4Q4UJ75 823 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 HES3Q5TGS1 186 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 IYDQ6PHW0 289 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 PACS1Q6VY07 963 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 FAM83HQ6ZRV2 1179 aaPredicted RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 TMEM135Q86UB9 458 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 PDIK1LQ8N165 341 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 SFRP1Q8N474 314 aa16.47■□□□□ 0.23
PRKCB-210ENST00000498739 Q8N9G6 341 aaPredicted RBP16.47■□□□□ 0.23
PRKCB-210ENST00000498739 BBOF1Q8ND07 529 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms