RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 WIPF3A6NGB9 483 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 A6NL46 340 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF185O15231 689 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 SCRG1O75711 98 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 CEACAM4O75871 244 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TMEM63AO94886 807 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 CDK14O94921 469 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 LDLRP01130 860 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 GZMAP12544 262 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 VCLP18206 1134 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 CDK11BP21127 795 aaKnown RBP13.66□□□□□ -0.22
CCDC58-207ENST00000498466 CCNCP24863 283 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TNFRSF8P28908 595 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 CD86P42081 329 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 HALP42357 657 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 LAMB3Q13751 1172 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 GALNT3Q14435 633 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 NR6A1Q15406 480 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 ASIC2Q16515 512 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
CCDC58-207ENST00000498466 AGAP9Q5VTM2 703 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 KLHL35Q6PF15 583 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 WASH2PQ6VEQ5 465 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 CERS6Q6ZMG9 384 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 HPS6Q86YV9 775 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TICAM1Q8IUC6 712 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TMEM126BQ8IUX1 230 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF547Q8IVP9 402 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 GPR26Q8NDV2 337 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 PNPLA2Q96AD5 504 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 EID2BQ96D98 161 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 TRIM11Q96F44 468 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 MAP3K3Q99759 626 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 NUP85Q9BW27 656 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 NUDT9Q9BW91 350 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 SEMA5BQ9P283 1151 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 SHOC2Q9UQ13 582 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 ESPL1Q14674 2120 aa13.66□□□□□ -0.22
CCDC58-207ENST00000498466 SHANK1Q9Y566 2161 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 SSU72P8A0A1W2PR75 194 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 KRT86O43790 486 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 VEGFDO43915 354 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 JCHAINP01591 159 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 KLK3P07288 261 aaPredicted RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 CD48P09326 243 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 MYBL1P10243 752 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 FECHP22830 423 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 DCDC1P59894 354 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 SLC25A11Q02978 314 aaKnown RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 GPS2Q13227 327 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 PLCL1Q15111 1095 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 NCBP2-AS2Q69YL0 99 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 PDPK2PQ6A1A2 396 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF571Q7Z3V5 609 aaPredicted RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 KMT5CQ86Y97 462 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 TRAPPC5Q8IUR0 188 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 SRRM1Q8IYB3 904 aaKnown RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 RBMXL3Q8N7X1 1067 aaKnown RBP13.65□□□□□ -0.22
CCDC58-207ENST00000498466 C19orf60Q96EN9 201 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 C5orf34Q96MH7 638 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 CHST8Q9H2A9 424 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 MYO6Q9UM54 1294 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 SLC5A6Q9Y289 635 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 CACNA1DQ01668 2161 aa13.65□□□□□ -0.22
CCDC58-207ENST00000498466 DDX3XO00571 662 aaKnown RBP eCLIP13.64□□□□□ -0.231e-9■■□□□ 13.9
CCDC58-207ENST00000498466 MMP2P08253 660 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 PIRTP0C851 137 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 SSR1P43307 286 aaKnown RBP13.64□□□□□ -0.23
CCDC58-207ENST00000498466 TUBB4BP68371 445 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 HSD11B2P80365 405 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 PAFAH1B3Q15102 231 aaKnown RBP13.64□□□□□ -0.23
CCDC58-207ENST00000498466 ENDOVQ8N8Q3 282 aaKnown RBP13.64□□□□□ -0.23
CCDC58-207ENST00000498466 GPR150Q8NGU9 434 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 ADAMTS17Q8TE56 1095 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 FATE1Q969F0 183 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
CCDC58-207ENST00000498466 BTBD6Q96KE9 485 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 TSGA13Q96PP4 275 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 TUBB2BQ9BVA1 445 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 KCND1Q9NSA2 647 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 GPR83Q9NYM4 423 aa13.64□□□□□ -0.23
CCDC58-207ENST00000498466 TLCD2A6NGC4 264 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 CBX6O95503 412 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 VAV2P52735 878 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 GSDMDP57764 484 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 MYL5Q02045 173 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms