RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CHRNA2Q15822 529 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TPD52L1Q16890 204 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ZXDCQ2QGD7 858 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 SPATS1Q496A3 300 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SBK1Q52WX2 424 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SGO2Q562F6 1265 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 KHDC1LQ5JSQ8 128 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 WIPI1Q5MNZ9 446 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 BEND6Q5SZJ8 279 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.42□□□□□ -2.18
XRN1-214ENST00000498077 BEND3Q5T5X7 828 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SLC18B1Q6NT16 456 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 C1orf228Q6PIY5 440 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CRTC3Q6UUV7 619 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 DPH6Q7L8W6 267 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 FRMD5Q7Z6J6 570 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 VPS37DQ86XT2 251 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CBARPQ8N350 705 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 RIBC1Q8N443 379 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 FAM47BQ8NA70 645 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 LEMD2Q8NC56 503 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PSD4Q8NDX1 1056 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 OR4X2Q8NGF9 303 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 OR1N1Q8NGS0 311 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RPLP0P6Q8NHW5 317 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 GPT2Q8TD30 523 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 OIT3Q8WWZ8 545 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 HAS1Q92839 578 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TOP1MTQ969P6 601 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 EAF2Q96CJ1 260 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ALG14Q96F25 216 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PDXPQ96GD0 296 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TOE1Q96GM8 510 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 RBM41Q96IZ5 413 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ZBTB45Q96K62 511 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 TEKT5Q96M29 485 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 AP1S3Q96PC3 154 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RAB40CQ96S21 281 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 KRT12Q99456 494 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 FEZ1Q99689 392 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 IER2Q9BTL4 223 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 DDX23Q9BUQ8 820 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 TMEM39BQ9GZU3 492 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TAOK3Q9H2K8 898 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 UBQLN3Q9H347 655 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TCEAL2Q9H3H9 227 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 CDC42EP4Q9H3Q1 356 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 POFUT1Q9H488 388 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RETNQ9HD89 108 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 EIF2B3Q9NR50 452 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 SPATS2LQ9NUQ6 558 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ARL15Q9NXU5 204 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 NUDT4Q9NZJ9 180 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CNTN3Q9P232 1028 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 EBF1Q9UH73 591 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 IP6K2Q9UHH9 426 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PADI1Q9ULC6 663 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 STARD10Q9Y365 291 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PCDHGC5Q9Y5F6 944 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 FAM208AQ9UK61 1670 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 NID2Q14112 1375 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 ROBO2Q9HCK4 1378 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 FER1L6Q2WGJ9 1857 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TRGV11A0A075B6L2 103 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TRBV23OR9-2A0A075B6M9 112 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 A0A0A6YYJ9 748 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 LOC100506127A0A0U1RQW1 187 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PABPN1LA6NDY0 278 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 TCP10L2B9ZVM9 353 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TNFRSF13BO14836 293 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 PMM2O15305 246 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 IRAK2O43187 625 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SPOPO43791 374 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SLC43A1O75387 559 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SLITRK5O94991 958 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 HMGCRP04035 888 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RPLP0P05388 317 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 SP9P0CG40 484 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 KITP10721 976 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 ADH5P11766 374 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 KRT3P12035 628 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CKMT1AP12532 417 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 ZNF14P17017 642 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ZNF182P17025 639 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 LORP23490 312 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 FASP25445 335 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 GGT5P36269 586 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 GNPDA1P46926 289 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TRAPPC10P48553 1259 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RAB27AP51159 221 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CCR5P51681 352 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 ERVFC1P60507 584 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SEC61A1P61619 476 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 CLDN10P78369 228 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SLC25A3Q00325 362 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CFHR1Q03591 330 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 FOXI1Q12951 378 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SCARB2Q14108 478 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CASP8Q14790 479 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 GRM3Q14832 879 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms