RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 RHOXF1Q8NHV9 184 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 GPRASP2Q96D09 838 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 UHRF1Q96T88 793 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 MINDY3Q9H8M7 445 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 NUFIP1Q9UHK0 495 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 DNAJC15Q9Y5T4 150 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 UBFD1O14562 309 aaKnown RBP10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 VTNP04004 478 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 GPX3P22352 226 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 HMGCS2P54868 508 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 SH3BP2P78314 561 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 CLCA4Q14CN2 919 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 NR6A1Q15406 480 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 DPY19L1Q2PZI1 675 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 DACT2Q5SW24 774 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 PXDC1Q5TGL8 231 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 GALNT10Q86SR1 603 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 DCP2Q8IU60 420 aaKnown RBP10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 MFSD6LQ8IWD5 586 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 PELI3Q8N2H9 469 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 CAMKK1Q8N5S9 505 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 DNERQ8NFT8 737 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 FYTTD1Q96QD9 318 aaKnown RBP10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 YME1L1Q96TA2 773 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 COPS4Q9BT78 406 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 C1QTNF1Q9BXJ1 281 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 MMP28Q9H239 520 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 TIGARQ9NQ88 270 aa10.52□□□□□ -0.72
TRAPPC12-223ENST00000497597 TRIP11Q15643 1979 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 FAM172BPA6NC97 362 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ARVCFO00192 962 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 RGS10O43665 173 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 SLC22A3O75751 556 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 YBX3P16989 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ARL2P36404 184 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 SELPLGQ14242 412 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 STXBP2Q15833 593 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 BCL7AQ4VC05 210 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 NXNL2Q5VZ03 156 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 SIGIRRQ6IA17 410 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 EFCAB12Q6NXP0 572 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 TTC23LQ6PF05 361 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 GET4Q7L5D6 327 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 COLGALT2Q8IYK4 626 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 DCP1BQ8IZD4 617 aaKnown RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 TRIM63Q969Q1 353 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 SLC47A1Q96FL8 570 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 CDHR1Q96JP9 859 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 VPS35Q96QK1 796 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 GFM1Q96RP9 751 aaKnown RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 FDXACB1Q9BRP7 624 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 YTHDF1Q9BYJ9 559 aaKnown RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 AMBRA1Q9C0C7 1298 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 RGS18Q9NS28 235 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ZNF70Q9UC06 446 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 STAP1Q9ULZ2 295 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 FXYD1O00168 92 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 HTR1AP08908 422 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 UQCRC1P31930 480 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ICAM3P32942 547 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 KCNC1P48547 511 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 CREB5Q02930 508 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 MXD1Q05195 221 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 LY6KQ17RY6 165 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 STRIP1Q5VSL9 837 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 FAM160B1Q5W0V3 765 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ZNF544Q6NX49 715 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 CDH24Q86UP0 819 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 BPHLQ86WA6 291 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 CCDC28AQ8IWP9 274 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 DTWD1Q8N5C7 304 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 TMEM125Q96AQ2 219 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ZNF641Q96N77 438 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 NEDD4LQ96PU5 975 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 OR2B2Q9GZK3 357 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 RUBCNLQ9H714 662 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 CPNE5Q9HCH3 593 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 ZFP14Q9HCL3 533 aa10.52□□□□□ -0.73
TRAPPC12-223ENST00000497597 PNMA8CA0A1B0GUJ8 204 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 A8MUA0 341 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 hCG_2039718K7EN88 272 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 ENPP3O14638 875 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 IGFBP5P24593 272 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 CYP2C18P33260 490 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 EIF2DP41214 584 aaKnown RBP10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 ARHGDIAP52565 204 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 PTPRCAPQ14761 206 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 FSCN1Q16658 493 aaKnown RBP10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 ZNF648Q5T619 568 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 PKN3Q6P5Z2 889 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 CYS1Q717R9 158 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 GDPD3Q7L5L3 318 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 PHACTR4Q8IZ21 702 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 OR2T12Q8NG77 320 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 UTP15Q8TED0 518 aaKnown RBP10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 JPH3Q8WXH2 748 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 PIK3R3Q92569 461 aa10.51□□□□□ -0.73
TRAPPC12-223ENST00000497597 CCDC126Q96EE4 140 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms