RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 EMC1Q8N766 993 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SLAIN1Q8ND83 568 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SLC7A6Q92536 515 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 FCGR1BQ92637 280 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 RPL3LQ92901 407 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 LRRC58Q96CX6 371 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 GPR22Q99680 433 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 RBM4BQ9BQ04 359 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 MXRA8Q9BRK3 442 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 PDCD2LQ9BRP1 358 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 RBM4Q9BWF3 364 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 NTN4Q9HB63 628 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 TIGARQ9NQ88 270 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 PLSCR3Q9NRY6 295 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SCN3BQ9NY72 215 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 AP3M1Q9Y2T2 418 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 AUP1Q9Y679 476 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 LINC00862A6NCI5 91 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 STX7O15400 261 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 PDGFAP04085 211 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ACADMP11310 421 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 GPD1P21695 349 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SLC26A3P40879 764 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SLC15A1P46059 708 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 NCS1P62166 190 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 CTU2Q2VPK5 515 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 Q5BKY6 102 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 OTUD3Q5T2D3 398 aaPredicted RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 TMEM135Q86UB9 458 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 FUNDC1Q8IVP5 155 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 FLCNQ8NFG4 579 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SGCDQ92629 289 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 COPS5Q92905 334 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SH3KBP1Q96B97 665 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 SCYL1Q96KG9 808 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 HSFY1Q96LI6 401 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ZNF578Q96N58 590 aaPredicted RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 SPATA13Q96N96 652 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 DEFB118Q96PH6 123 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 PEBP4Q96S96 227 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 MRPL57Q9BQC6 102 aaKnown RBP8.98□□□□□ -0.97
HPS4-217ENST00000496385 TTYH2Q9BSA4 534 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 TRMOQ9BU70 441 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 UGT2B28Q9BY64 529 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 CCDC90BQ9GZT6 254 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ALG2Q9H553 416 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 KLHL21Q9UJP4 597 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 USP22Q9UPT9 525 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 KCNE2Q9Y6J6 123 aa8.98□□□□□ -0.97
HPS4-217ENST00000496385 ZNF236Q9UL36 1845 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 CCDC85CA6NKD9 419 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 FXYD1O00168 92 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 MDM4O15151 490 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 NPPAP01160 153 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 CD4P01730 458 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 RAP2AP10114 183 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 CCL5P13501 91 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 RPL17P18621 184 aaKnown RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 HDCP19113 662 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 ATP5F1P24539 256 aaPredicted RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 HNF4AP41235 474 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 MAGEA11P43364 429 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 SOX10P56693 466 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 FAPQ12884 760 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 SPANXN2Q5MJ10 180 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 ZNF470Q6ECI4 717 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 DENND5AQ6IQ26 1287 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 LAIR2Q6ISS4 152 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 METTL2BQ6P1Q9 378 aaKnown RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 LARP4Q71RC2 724 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-217ENST00000496385 SPATC1Q76KD6 591 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 STK32CQ86UX6 486 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 ZC3HC1Q86WB0 502 aaKnown RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-217ENST00000496385 FSTL5Q8N475 847 aaPredicted RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 AADATQ8N5Z0 425 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 PAF1Q8N7H5 531 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 APPL2Q8NEU8 664 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 OR10T2Q8NGX3 314 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 PCDH19Q8TAB3 1148 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 MCOLN3Q8TDD5 553 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 POP5Q969H6 163 aaKnown RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 SLC38A4Q969I6 547 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 TMBIM1Q969X1 311 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 PRDM8Q9NQV8 689 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 GLTPQ9NZD2 209 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 PCDHGA10Q9Y5H3 936 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 A0A0J9YYE9 177 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 LOC100130705A0A1B0GUX0 176 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 TLL1O43897 1013 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 KCNJ13O60928 360 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 USP12O75317 370 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 ARIH2O95376 493 aa8.97□□□□□ -0.97
HPS4-217ENST00000496385 GTF2E2P29084 291 aaKnown RBP8.97□□□□□ -0.97
HPS4-217ENST00000496385 TIE1P35590 1138 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms