RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 METTL2BQ6P1Q9 378 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 ZNF549Q6P9A3 640 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 AAGABQ6PD74 315 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PAQR3Q6TCH7 311 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 FAM151BQ6UXP7 276 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 GDPD4Q6W3E5 623 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 BNC2Q6ZN30 1099 aaPredicted RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 MAVSQ7Z434 540 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 CYP2U1Q7Z449 544 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SERPINA9Q86WD7 417 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 TREML1Q86YW5 311 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 CAMK1DQ8IU85 385 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 DDIASQ8IXT1 998 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 TCAIMQ8N3R3 496 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ENDOVQ8N8Q3 282 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 KDM1BQ8NB78 822 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 KYQ8NBH2 561 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PCYOX1LQ8NBM8 494 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 OR6K2Q8NGY2 324 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 GIMAP7Q8NHV1 300 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 RIN3Q8TB24 985 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SPPL3Q8TCT6 385 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 WFDC5Q8TCV5 224 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 UCMAQ8WVF2 138 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ANKRD49Q8WVL7 239 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PIH1D2Q8WWB5 315 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ATP6V1E2Q96A05 226 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 C19orf60Q96EN9 201 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PPP1R16AQ96I34 528 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 MAELQ96JY0 434 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 PPP1R36Q96LQ0 422 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 MAGEB10Q96LZ2 347 aaPredicted RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 ATOH8Q96SQ7 321 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 COPS8Q99627 209 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 MIPEPQ99797 713 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 EGFL8Q99944 293 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 HEPHQ9BQS7 1158 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SLC25A23Q9BV35 468 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SHCBP1LQ9BZQ2 653 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 GSTO2Q9H4Y5 243 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SFXN1Q9H9B4 322 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ZBTB26Q9HCK0 441 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 CD248Q9HCU0 757 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 THG1LQ9NWX6 298 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 KCTD5Q9NXV2 234 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ZDHHC3Q9NYG2 299 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 DHRS7Q9Y394 339 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 TRAF6Q9Y4K3 522 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 DOCK8Q8NF50 2099 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 CKAP5Q14008 2032 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TICRRQ7Z2Z1 1910 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 NEMP2A6NFY4 417 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 A8MUI8 341 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 HIDE1A8MVS5 230 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 MEI4A8MW99 385 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 WASH3PC4AMC7 463 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SDHDO14521 159 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SIAH2O43255 324 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 GRID2O43424 1007 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 CLASP2O75122 1294 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 PEX11AO75192 247 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 NIPSNAP2O75323 286 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 KATNA1O75449 491 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 ECI2O75521 394 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 PSMG1O95456 288 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 FTH1P02794 183 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 FGF4P08620 206 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 RPS17P08708 135 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 ALPIP09923 528 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 UROSP10746 265 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 PCSK2P16519 638 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 LBPP18428 481 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 CYP2A7P20853 494 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 WEE1P30291 646 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 HLA-FP30511 346 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 HMOX2P30519 316 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 AKT1P31749 480 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 VIPR1P32241 457 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 HNF1BP35680 557 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 VHLP40337 213 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 DGKGP49619 791 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SEC13P55735 322 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 XIAPP98170 497 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 CLCQ05315 142 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 BTKQ06187 659 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 MAD2L1Q13257 205 aaPredicted RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 GPM6BQ13491 265 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 FASTKQ14296 549 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 IHHQ14623 411 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 KPNB1Q14974 876 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 RCN1Q15293 331 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TSNQ15631 228 aaKnown RBP6.84□□□□□ -1.31
USP39-219ENST00000496047 GSTA3Q16772 222 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 UNC50Q53HI1 259 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 CTSL3PQ5NE16 218 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 PRMT9Q6P2P2 845 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 TTC23LQ6PF05 361 aa6.84□□□□□ -1.31
USP39-219ENST00000496047 SPATA19Q7Z5L4 167 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms