RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 KLHL35Q6PF15 583 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 KMT5CQ86Y97 462 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 CNTD1Q8N815 330 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 LRRN4Q8WUT4 740 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 TRIB3Q96RU7 358 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 AKIRIN1Q9H9L7 192 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-209ENST00000495630 SHOC2Q9UQ13 582 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 PCDHGB7Q9Y5F8 929 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 UNC79Q9P2D8 2635 aa17.22■□□□□ 0.35
TMEM53-209ENST00000495630 IGHV5-51A0A0C4DH38 117 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 SEMA7AO75326 666 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 DDAH2O95865 285 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 VARSP26640 1264 aaKnown RBP17.21■□□□□ 0.35
TMEM53-209ENST00000495630 HALP42357 657 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 DRG2P55039 364 aaKnown RBP17.21■□□□□ 0.35
TMEM53-209ENST00000495630 GBE1Q04446 702 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 GALNT3Q14435 633 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 NADK2Q4G0N4 442 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-209ENST00000495630 PQLC3Q8N755 202 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 FAF2Q96CS3 445 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 VPS35Q96QK1 796 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 SRPK1Q96SB4 655 aaKnown RBP17.21■□□□□ 0.35
TMEM53-209ENST00000495630 GPR63Q9BZJ6 419 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 ING2Q9H160 280 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 ACSS2Q9NR19 701 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 FGF21Q9NSA1 209 aa17.21■□□□□ 0.35
TMEM53-209ENST00000495630 NBPF19A0A087WUL8 3843 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 KCNK1O00180 336 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 MTX2O75431 263 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 SORBS2O94875 1100 aaKnown RBP17.2■□□□□ 0.34
TMEM53-209ENST00000495630 BPIP17213 487 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 LPOP22079 712 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-209ENST00000495630 FECHP22830 423 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 IFI35P80217 286 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-209ENST00000495630 TMEM115Q12893 351 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-209ENST00000495630 C11orf96Q7Z7L8 435 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 BRSK1Q8TDC3 778 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 ZNF514Q96K75 400 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-209ENST00000495630 RUFY1Q96T51 708 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 NAT10Q9H0A0 1025 aaKnown RBP17.2■□□□□ 0.34
TMEM53-209ENST00000495630 TRIM10Q9UDY6 481 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 WDR37Q9Y2I8 494 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 ZNF451Q9Y4E5 1061 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 MYO9AB2RTY4 2548 aa17.2■□□□□ 0.34
TMEM53-209ENST00000495630 CREBBPQ92793 2442 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 PIRTP0C851 137 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 ARL4DP49703 201 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 HSD11B2P80365 405 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 PPIDQ08752 370 aaKnown RBP17.19■□□□□ 0.34
TMEM53-209ENST00000495630 LAMB3Q13751 1172 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 KCNAB1Q14722 419 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 INPP5JQ15735 1006 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-209ENST00000495630 CHRNA6Q15825 494 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 KHDC1Q4VXA5 237 aaKnown RBP17.19■□□□□ 0.34
TMEM53-209ENST00000495630 FIGNQ5HY92 759 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 HGSNATQ68CP4 663 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 HPS6Q86YV9 775 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 OR8K5Q8NH50 307 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 SYN2Q92777 582 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-209ENST00000495630 IMP4Q96G21 291 aaKnown RBP17.19■□□□□ 0.34
TMEM53-209ENST00000495630 ZNF830Q96NB3 372 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-209ENST00000495630 CD180Q99467 661 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 TMPRSS11EQ9UL52 423 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 ZNF711Q9Y462 761 aa17.19■□□□□ 0.34
TMEM53-209ENST00000495630 ESPL1Q14674 2120 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 ARGFXA6NJG6 315 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 ENO4A6NNW6 628 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 CEACAM4O75871 244 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 PPP1CAP62136 330 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 RPS18P62269 152 aaKnown RBP17.18■□□□□ 0.34
TMEM53-209ENST00000495630 CDK18Q07002 472 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 DMPKQ09013 629 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 ZBTB17Q13105 803 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 GTF2H3Q13889 308 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 IZUMO3Q5VZ72 239 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 CPZQ66K79 652 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 CCDC70Q6NSX1 233 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 ZNF517Q6ZMY9 492 aaPredicted RBP17.18■□□□□ 0.34
TMEM53-209ENST00000495630 AMZ2Q86W34 360 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 TRAPPC5Q8IUR0 188 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 D2HGDHQ8N465 521 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 DTX3LQ8TDB6 740 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 TADA1Q96BN2 335 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 TTC25Q96NG3 672 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 MAP3K3Q99759 626 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 SLC25A51Q9H1U9 297 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 KCND1Q9NSA2 647 aa17.18■□□□□ 0.34
TMEM53-209ENST00000495630 DNMT3AQ9Y6K1 912 aaPredicted RBP17.18■□□□□ 0.34
TMEM53-209ENST00000495630 SPENQ96T58 3664 aaKnown RBP17.17■□□□□ 0.34
TMEM53-209ENST00000495630 UBA6A0AVT1 1052 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-209ENST00000495630 TCP11X1B4DZS4 312 aa17.17■□□□□ 0.34
TMEM53-209ENST00000495630 DPM1O60762 260 aa17.17■□□□□ 0.34
TMEM53-209ENST00000495630 CPNE3O75131 537 aaKnown RBP17.17■□□□□ 0.34
TMEM53-209ENST00000495630 PROSCO94903 275 aa17.17■□□□□ 0.34
TMEM53-209ENST00000495630 KLK3P07288 261 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-209ENST00000495630 EBLN1P0CF75 366 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms