RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC8A3P57103 927 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 RPS16P62249 146 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 RPS24P62847 133 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ZBTB16Q05516 673 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ADIGQ0VDE8 80 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 CCDC173Q0VFZ6 552 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 LRMPQ12912 555 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 PKP1Q13835 747 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TRIM14Q14142 442 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 MPEG1Q2M385 716 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TTC31Q49AM3 519 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 FSCBQ5H9T9 825 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 C9orf64Q5T6V5 341 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF776Q68DI1 518 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ARHGAP17Q68EM7 881 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 KRT39Q6A163 491 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3GQ6DHY5 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 NADSYN1Q6IA69 706 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3CQ6IPX1 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 PMF1Q6P1K2 205 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 Q6ZRM9 215 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 MED25Q71SY5 747 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 INTS8Q75QN2 995 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 BHLHA9Q7RTU4 235 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 MYLK4Q86YV6 388 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 MFN1Q8IWA4 741 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3Q8IZP1 549 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 CARNMT1Q8N4J0 409 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 FBXL13Q8NEE6 735 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ENGASEQ8NFI3 743 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 SAP25Q8TEE9 199 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 WFIKKN2Q8TEU8 576 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 CLEC4CQ8WTT0 213 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 GOLGA1Q92805 767 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 SERAC1Q96JX3 654 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 LMLNQ96KR4 655 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 RSPH9Q9H1X1 276 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TMPRSS5Q9H3S3 457 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 PRORYQ9H606 182 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TMEM8AQ9HCN3 771 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ABCC13Q9NSE7 274 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 OLA1Q9NTK5 396 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 RAB20Q9NX57 234 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 MYO1AQ9UBC5 1043 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 HESX1Q9UBX0 185 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 STOML2Q9UJZ1 356 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 RCOR1Q9UKL0 485 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TSPAN16Q9UKR8 245 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 INTS6Q9UL03 887 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 SLC45A2Q9UMX9 530 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ERVW-1Q9UQF0 538 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 HBS1LQ9Y450 684 aaKnown RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 NAV2Q8IVL1 2488 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 KALRNO60229 2985 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 TP53BP1Q12888 1972 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 A0A1W2PR77 199 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CDHR4A6H8M9 788 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 LRRC72A6NJI9 287 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 DIRC3C9JPN6 131 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 TLR4O00206 839 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 APOL1O14791 398 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 XPO1O14980 1071 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 MAPK13O15264 365 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 RRP8O43159 456 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 ACSL4O60488 711 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 RNASEH1O60930 286 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SDC3O75056 442 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 C1SP09871 688 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 PFKFB1P16118 471 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 TNFRSF1AP19438 455 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CMA1P23946 247 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 MAT2AP31153 395 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 HNF1BP35680 557 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 PSMD8P48556 350 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 HSPA7P48741 367 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SLC11A2P49281 568 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CHN2P52757 468 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 METAP1P53582 386 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 ST8SIA6P61647 398 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 BST2Q10589 180 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 PRKD1Q15139 912 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CST6Q15828 149 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 HNRNPA1L2Q32P51 320 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 POM121L1PQ3SYA9 428 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 FAM133BQ5BKY9 247 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 HES3Q5TGS1 186 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 KDM7AQ6ZMT4 941 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 UNC45BQ8IWX7 931 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 APCDD1Q8J025 514 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SIX6OS1Q8N1H7 587 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 STK40Q8N2I9 435 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 AADATQ8N5Z0 425 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 FIBINQ8TAL6 211 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D15Q8TC07 691 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms